Desulfomarina profundi: DGMP_30780
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Entry
DGMP_30780 CDS
T07650
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
dbk
Desulfomarina profundi
Pathway
dbk02010
ABC transporters
dbk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DGMP_30780
03070 Bacterial secretion system
DGMP_30780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dbk02000
]
DGMP_30780
02044 Secretion system [BR:
dbk02044
]
DGMP_30780
Transporters [BR:
dbk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DGMP_30780
Secretion system [BR:
dbk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DGMP_30780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_22
DUF87
AAA_16
AAA_29
AAA_28
Zeta_toxin
AAA_23
nSTAND3
DO-GTPase2
AAA_18
MeaB
MobB
NB-ARC
AAA_30
SRP54
Motif
Other DBs
NCBI-ProteinID:
BCL62385
UniProt:
A0A8D5FRI1
LinkDB
All DBs
Position
3344716..3346854
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AA seq
712 aa
AA seq
DB search
MATNLSSLHSGLFCIAVISRMNGAPLEMEQLQHQFGSQTVQLTPLELARYFKESGINATL
VQKDIADLKKEFFPVVAMLDSGDYIVLARKNDEKRSLLVQESTRQRAQWVPLDKIQPRLT
DTFILLKKKVNQDERTEHFGLKWFFLAAAKYWTILRDCIFASMFVQIFALLSPLVFMIVI
DKVLSNNSLSTLDVLVLALIVASAFEILLNGVRAYLLSHTANRIDLMLGVRLFKHLLSLP
LSYFESRQVGDTIARMRELENVRQFITGSGLMLILDLFFLVVFITVMFLFSPFLSMLVVI
ALPFLFCTSLVITPFLRDRLEDQYAGNAGNQSFLVETISGIETIKATAAEPRIRTKWETR
LARHVKNGFKSGHLANLINQSTTVISKILSVLLLWFGAREVLQGNLTVGQLIAFNMLSSR
VIAPIIRLAQIWKEFEQVKISVARIGDIFSCTAEPGFDPNRVSLPSIRGDVVFDRVSFKY
HPERNEVLSDISFSVTAGEVVGIVGSTGSGKTTLVKLLQRLYVPERGRILLDGTDLCLAD
SSWLRRQMGVVLQDGVLFNMSIRDNIALNAPHLEIEKIIEAAKLSGAHPFIRELPEGYDT
LIGERGLLLSTGQRQRLAIARALATDPAMLILDEATSSLDYESELLIQQNMKNICKGRTV
FIIAHRLSTVRHADRIITLENGRIVENGPPEQLLSTDGRYALLHGIQEGSYA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggctacgaatttatccagtttacacagcggactgttctgtatcgccgtcatttcgaga
atgaacggtgccccccttgaaatggagcagctccaacatcagttcggctctcaaacagtt
caactcacaccccttgaactggcaagatatttcaaggaatcagggataaatgcaaccctg
gtacaaaaagatattgcggatcttaaaaaggaattttttcctgtggtggcaatgctggat
tccggcgattatatcgttcttgccaggaaaaacgatgaaaagcgttcccttcttgtccag
gaaagtaccaggcaacgggcacaatgggtgcccctggacaaaatacaaccccgccttaca
gacacgtttattctcctgaaaaaaaaggtgaaccaggatgaaagaactgaacatttcggc
ctgaagtggttctttttggccgcagcgaagtactggacaattctccgggactgcattttc
gcctccatgtttgtccagatttttgccctgctctcccctcttgtttttatgatcgtaatc
gacaaagttctgagcaacaacagcctttcgaccctcgatgtgctggttctggccctgatt
gtcgcctccgcttttgaaatactcctcaacggagtgcgggcttatctgctttcccacact
gctaacagaatcgatctgatgcttggagtgagactgttcaaacatctcttgtccctgccc
ctcagctattttgaaagcaggcaggtgggcgacacgatagccaggatgcgcgaactggag
aatgtcagacagttcatcactggctcaggactcatgctgattctcgatctgttcttcctg
gttgtctttatcactgtcatgttcctgttcagcccttttctgagtatgcttgttgtcatt
gccctgcctttcctgttctgcacttcactggtaataaccccctttctccgggacagactt
gaggatcaatatgccggtaatgcgggcaaccagtccttccttgtggagacaatctccgga
atagaaacgatcaaagccaccgccgcagaaccgaggatacggacaaaatgggaaaccaga
cttgcccgtcatgtaaaaaacggttttaaaagcggtcatctcgccaaccttatcaaccag
tccacaaccgttatcagcaaaatcctgtctgtcctgctgctctggttcggagcaagagaa
gtgctgcagggtaatctcacagtggggcagctcatcgccttcaatatgctgtcatcccgc
gtcattgcgccaataatcaggctggcccagatatggaaggaatttgagcaggtaaaaatc
tccgttgcccgcattggagacatcttttcatgtacggctgaacccggatttgatccgaac
cgcgtatccctgccatccatcaggggagacgttgtatttgaccgggtctcattcaaatat
caccctgaacgaaacgaagtcctgagcgatatttctttttctgttacagccggagaagta
gtcggtattgtcggcagtaccggatccggcaaaaccactctggtaaaactcctgcaacgc
ctctatgtcccggaacgtggcagaattctccttgacggaactgatctctgcctggctgac
agttcctggctgagaagacagatgggggtcgtactccaggacggggtcctcttcaatatg
tcgatcagggacaatattgccttaaacgcaccgcacctggaaattgaaaaaattattgaa
gctgccaaactctcaggcgcccatccgtttatccgggaactacccgaaggttacgacacc
ctgatcggagagcgaggattactgctgtccaccggccagcgtcagcgactggcaattgcc
cgggccctggccaccgacccggccatgctcatcctcgatgaggcaaccagcagcctcgac
tatgaatccgaactgctcatccaacagaatatgaagaatatctgcaaaggacgcaccgtc
tttatcattgcacaccgactttccaccgtccgccacgcggaccgaatcatcaccctggaa
aatggacgtatagttgaaaatggcccccctgagcagttgctgtccacggatggacgatac
gccttactgcatggaatccaggagggaagctatgcctga
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