Desulfomarina profundi: DGMP_33800
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Entry
DGMP_33800 CDS
T07650
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
dbk
Desulfomarina profundi
Pathway
dbk00541
Biosynthesis of various nucleotide sugars
dbk01100
Metabolic pathways
dbk01250
Biosynthesis of nucleotide sugars
Module
dbk_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DGMP_33800 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dbk01005
]
DGMP_33800 (kdsA)
Enzymes [BR:
dbk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
DGMP_33800 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
dbk01005
]
Lipid A
DGMP_33800 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
FlbD
Motif
Other DBs
NCBI-ProteinID:
BCL62687
UniProt:
A0A8D5FZB1
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Position
3675223..3676059
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AA seq
278 aa
AA seq
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MQEIKIEIPVPTGDPIVVGTGQPLLLIGGPCALESEEIARTVAEKMQEICNRLGISYIFK
ASFDKANRTSLSSYRGPGLEKGLMILASIRESMQLPVISDVHDASQVKAAAEVLDIIQIP
AFLCRQTDLLTEAARTGKVVNVKKGQFVSPWDMKNVVDKLRGVGGRKIMLVERGASFGYN
NLVVDMRSLPIMRSLGCPVVFDATHSVQLPGGAGGSSGGQREFIEPLARAATAAGIDGLF
MEIHPDPRKALCDGANSIALDDVEEVLKRIIKIRTALA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatcaaaattgagatacctgttccaaccggtgaccccattgtggtcggtaca
ggccaaccccttcttctgatcggtggcccatgtgctcttgaatcagaggaaattgcccgt
accgttgctgaaaaaatgcaggaaatctgcaatcgccttggtatttcatatattttcaag
gcttcctttgacaaggcaaacagaacatctctttcatcctaccggggacccggtcttgaa
aaagggttgatgatccttgcctcaatacgggaatcgatgcaacttccagtcatttcagat
gtgcacgatgccagccaggttaaagctgctgctgaagtacttgatatcatccagattccg
gcctttctctgtcgacagacagatcttctcaccgaagcggcccgaaccggcaaggttgtc
aatgtcaaaaagggtcagtttgtatccccctgggatatgaaaaacgtggtggacaaatta
cgtggggtcggtggcaggaaaatcatgctggttgaaaggggagccagctttggttacaac
aatcttgtggttgacatgcgctccctgccgataatgcgctccctcggctgcccggttgtc
tttgatgcaacccattccgttcagcttccaggtggtgccggaggctcttcaggtggacag
cgtgaattcattgaaccactggccagggcagctacggcagccgggattgatgggttgttc
atggagattcatccggacccccggaaagccctgtgcgatggtgccaactccatagccctg
gacgatgtggaagaggttttgaaaagaatcatcaaaattcggaccgctcttgcctga
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