Desulfomarina profundi: DGMP_34230
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Entry
DGMP_34230 CDS
T07650
Symbol
nifA
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
dbk
Desulfomarina profundi
Pathway
dbk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DGMP_34230 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dbk03000
]
DGMP_34230 (nifA)
Transcription factors [BR:
dbk03000
]
Prokaryotic type
Helix-turn-helix
Other families
DGMP_34230 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
GAF_2
HTH_8
AAA
AAA_2
Mg_chelatase
AAA_7
ATPase
AAA_16
nSTAND3
AAA_22
bpMoxR
AAA_3
GAF_3
IstB_IS21
TsaE
DUF815
RsgA_GTPase
PRP8_domainIV
ResIII
NACHT
AAA_30
FtsL_2
Motif
Other DBs
NCBI-ProteinID:
BCL62730
UniProt:
A0A8D5FS93
LinkDB
All DBs
Position
complement(3719420..3720973)
Genome browser
AA seq
517 aa
AA seq
DB search
MVHKNDISKQLEDLTALYEITKQLASSKELSECLESTMFILSEIKGMENGTVSIVNPLTG
NLEIEVAHGISAAGKKRGKYRIGEGITGRVVATGEPIIVPHIAEEPLFLNRTGARENVKK
QKRSFLCVPIKDGQNIIGALSVDIIYKNGITEQANTDLQFLTVLSSIIAQTVVRVQKVNR
ETEELYSENLKLKRELSEKNKINDIIGNSSKMQEVYEMIHRVVDSNATVLLRGESGTGKT
LVAKALHYNGKRKSAPFIVVNCSALPETLLESELFGHEKGSFTGANELKIGRFEQAEGGT
LFLDEIGEISHSVQVKLLNVVQERKFQRLGSTNLIECDVRLVAATNRDLEKAVAEKNFRE
DLYYRLNVFPVYMPPLRERRTDILLLAEFFLEKYSKENNKKIIRISTTAIDMLIQYHWPG
NVRELQNCIERAVLICDGDTIKSIHLPPTLQTAGNSSREKPLSLSVAVENFEKELIVEGL
KRNNGNQTKTAKDLDTSLRIINYKIHQYNIDPKKFKI
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggtacacaaaaacgatatctccaaacaactggaagatctcacggccctttatgaaata
actaaacaactggcatcttcaaaagaactcagtgaatgcctggaaagcaccatgtttatt
ctttcagaaataaaagggatggaaaatggtactgtttccatcgttaacccattaaccgga
aaccttgagatagaagttgcccatggaatatctgcagctgggaaaaagcgtggaaaatat
agaataggggaggggattacagggagagttgttgccacaggcgaacctattatcgttcca
catattgccgaagaaccattatttctcaatagaactggagcacgtgaaaacgtaaagaaa
caaaagagatcttttctgtgtgttcccatcaaggatggacaaaacattataggtgctctc
agtgttgatatcatatataaaaacggtattaccgaacaggccaataccgatctgcaattc
ctcacagttttaagttcaataattgcccagactgttgtcagagtacaaaaagtaaacagg
gagaccgaagaactttattctgaaaaccttaagcttaaaagagagctttcagaaaagaat
aaaattaatgatattataggtaattcgagcaaaatgcaggaagtgtatgaaatgatacac
agggttgttgactctaatgcaactgtccttcttcgtggcgaatcaggtacaggaaaaaca
cttgtggcaaaagctcttcattacaatggcaaaagaaaatccgcaccctttatcgttgtt
aattgttctgctcttcctgaaacccttttggaaagtgaactttttggtcatgaaaaaggt
tcattcaccggtgcaaatgagctgaaaattggacgttttgaacaggctgaaggagggacc
ctgttccttgatgagataggtgaaatcagccattcagtacaggttaaactcctcaatgtt
gtgcaggaaagaaagttccagagacttggttcaacaaacctcatcgaatgtgatgttcga
ctcgttgcagcaacaaacagagatcttgaaaaggcggttgcagaaaaaaatttcagagaa
gatctctactacagacttaatgtttttcctgtgtatatgccccccttaagagagcgacga
actgacattctccttcttgctgaattttttcttgaaaaatattctaaagaaaacaacaaa
aaaattatcagaatttccaccacagcaatagacatgttgattcagtaccattggcccggg
aatgtcagggaactccagaactgtattgaaagggctgtgcttatctgtgatggtgacact
ataaaatcaattcaccttccaccgacacttcaaactgctgggaattcatccagggaaaaa
cctctttctctttcagttgcagtagaaaattttgaaaaagaacttatagttgaagggctg
aaacgaaacaatggtaaccagacaaagactgcaaaagacctggatacaagcctgagaatc
attaattataagatccatcagtataatattgatccaaaaaaatttaagatttga
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