Desulfomarina profundi: DGMP_35770
Help
Entry
DGMP_35770 CDS
T07650
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dbk
Desulfomarina profundi
Pathway
dbk00300
Lysine biosynthesis
dbk00470
D-Amino acid metabolism
dbk01100
Metabolic pathways
dbk01110
Biosynthesis of secondary metabolites
dbk01120
Microbial metabolism in diverse environments
dbk01230
Biosynthesis of amino acids
Module
dbk_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DGMP_35770 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DGMP_35770 (dapF)
Enzymes [BR:
dbk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DGMP_35770 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Glyco_hydro_16
Motif
Other DBs
NCBI-ProteinID:
BCL62884
UniProt:
A0A8D5JIN6
LinkDB
All DBs
Position
3875373..3876209
Genome browser
AA seq
278 aa
AA seq
DB search
MSISFPLEFEKMSGTGNDFVIIDNRNNVVPVEEQSEFAGKICRRMFSVGADGLILIENSD
KTDFGWSFYNADGSLADMCGNGARCAARFAFRHGIAEAKMRFATSAGIVEAEILDDEVVR
LQMTQPFDFRLGLSMNLGGEERPVAFVNTGVPHAVIFVEDEEIAVKKLGRKVRFHELFEP
KGANANFARILDDGRLEVRTYERGVEDETMACGTGAVAAALFATMQKGMESPVEVVTSGG
EELTVIFDLLDGPVAENVFLQGPARCIFTGKLTAEALL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtccatttcctttcccctcgaatttgagaaaatgagtgggaccggcaatgattttgtt
attatagataatagaaacaatgttgttccggtggaagagcagagtgagtttgccgggaaa
atatgcaggcggatgttttcagttggtgcggacggtctgattctgatagagaattccgat
aaaaccgattttggctggtctttttataatgcagatggttctttggccgacatgtgcggc
aatggtgcacggtgcgctgccagatttgcttttcgccacgggattgcggaggcgaagatg
cggtttgcaacgagtgccggaatagttgaagcggaaatcctggacgatgaggttgtccgg
ttgcagatgactcaaccctttgatttcaggctgggcctttccatgaaccttgggggtgag
gaacgtccggtggcttttgtgaataccggcgtaccccatgccgtgatatttgttgaagat
gaagagattgctgtgaagaaactggggcgcaaggttcggtttcatgagctgtttgaaccc
aaaggggccaatgccaattttgccaggattctcgatgatggtcgactggaggtgcgtact
tacgagcggggtgtggaggacgaaaccatggcttgcggcacaggagctgttgctgccgcc
ctttttgctaccatgcagaagggaatggaatctcccgtggaggtggtgacttccggtggt
gaggaattgacggttattttcgatctgcttgacgggcctgtagccgaaaatgtatttctg
caggggcccgctcgatgtatatttacaggaaaattgacggctgaagctctgctttag
DBGET
integrated database retrieval system