Desulfomarina profundi: DGMP_36590
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Entry
DGMP_36590 CDS
T07650
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
dbk
Desulfomarina profundi
Pathway
dbk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DGMP_36590 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dbk01007
]
DGMP_36590 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dbk03016
]
DGMP_36590 (hisS)
Enzymes [BR:
dbk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
DGMP_36590 (hisS)
Amino acid related enzymes [BR:
dbk01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DGMP_36590 (hisS)
Transfer RNA biogenesis [BR:
dbk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DGMP_36590 (hisS)
Prokaryotic type
DGMP_36590 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
tRNA-synt_2
Zn_ribbon_5
Motif
Other DBs
NCBI-ProteinID:
BCL62966
UniProt:
A0A8D5FX65
LinkDB
All DBs
Position
3975245..3976501
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AA seq
418 aa
AA seq
DB search
MKIKALKGFKDILPGEVEVWQKVETTARNIFSRFDFSEIRLPVLEKTELFARSIGEDTDI
VEKEMYTFVDKQITMRPEATASLLRAYIEHGLKVKKPVQRLFTIGPMFRHERPQKGRLRQ
FHQMDVEVLGSESPLVDAELMAMGAMLFKELGISVSLEMNSLGCPLCRPAYRRALLDFIE
SRKDGLCDDCRRRSSTNPLRVLDCKKTACRELVDQAPSILEALCPDCKTHFSTVQDGLKQ
LGVQYRLNKFMVRGLDYYCRTTFEFITKDLGAQAAVAAGGRYDGLVEKLGGPKNTPGIGF
AMGLERIVLLLLQEKKVTIERNGPDLFVIGLGDKGLELSYGLVHDLRSRKIYVAMDHEGK
SLKSQMKQANKAGAVHVLIIGDDEVDRSRGNLKEMESGQQQEVKLEAASLVEVMNLNM
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgaagataaaggctctgaaaggctttaaggatattctgccgggtgaggttgaagtctgg
cagaaggtggaaacaacagccaggaatattttttcccgttttgatttttcggagataagg
cttcctgttctggaaaagacggaactttttgcacgatctatcggtgaagatacggatatc
gtggaaaaggagatgtatacctttgttgacaagcagataaccatgcggccggaagcaacc
gcgtcactccttcgagcttatattgaacacggattgaaagtcaaaaagcccgtccagcga
ctgttcaccattggtccaatgtttcgccatgagcggccccagaaaggcaggctcaggcag
tttcaccagatggatgtggaggttctcgggtcggagagtcctctggtggatgctgagttg
atggccatgggggccatgctgtttaaagagcttggcatatcagtcagcctggaaatgaat
tctctcggctgtccattgtgtcgtcctgcatatcgccgggcgctgctcgattttattgaa
agtcgtaaagatggtctgtgtgatgactgcaggaggcgaagttccacaaatcccctgcgg
gttcttgactgcaagaaaacagcgtgtcgtgaactggtggatcaggctccttccatactg
gaagccctctgtcctgattgtaaaacacatttttcgacagtgcaggacggtttgaaacaa
ctgggagtgcagtacaggttaaataagttcatggttcgtggtcttgattattattgccgg
actacatttgaatttattacaaaagatctcggggcccaggcggcagtagcggctggtgga
agatatgacggtcttgtggagaaactgggaggtcctaaaaatacaccgggaatcggtttc
gccatggggttggagcggattgttctcctccttctgcaggagaagaaagttacaattgaa
aggaatggtccggatctctttgtgattggcctgggggacaaggggctggagcttagctat
ggccttgtccatgatctgcgcagcagaaaaatttatgtggccatggaccatgaagggaag
agcctgaaaagccagatgaaacaggccaacaaggctggggcggtgcatgtcctgataatt
ggagatgatgaggtcgatcgcagtagaggaaacctcaaggaaatggaatcagggcagcag
caggaggtcaagcttgaggctgcttcattggtagaggtaatgaacctgaatatgtga
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