Desulfomarina profundi: DGMP_38340
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Entry
DGMP_38340 CDS
T07650
Name
(GenBank) peptide ABC transporter permease
KO
K02034
peptide/nickel transport system permease protein
Organism
dbk
Desulfomarina profundi
Pathway
dbk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DGMP_38340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dbk02000
]
DGMP_38340
Transporters [BR:
dbk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DGMP_38340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
BCL63141
UniProt:
A0A8D5JTF9
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All DBs
Position
4162279..4163151
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AA seq
290 aa
AA seq
DB search
MKNFFALKRVRSFFGDPSGMLGAAILLTFIIAAVFAPLIAPMDPYDLTSVDLANFLLEPS
WMDNGVSAFPLGTDDQGRGILSTILYGLRTSLIVGGSVVTISSIIGIVLGMLGAYYGGIL
DAFIMRAADTVFSFSTTLLAVLLLGVFESRGVFTVILAICIADWVKYARTIRGSVLEIKE
YPYVTAARSSGAGDFRILFRHILPNALPPIFVVMAVDMAVVIMLEATLSFLGVGVPLTEP
SLGMMIAIGKNYIYAGMWWMVVFPGATLIAMVVGINLFADWLREELNPKL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttctttgcactcaaaagggtacgttcgttttttggtgatccgtcggggatg
cttggcgcagctattctgctcacctttattatcgcagcagtttttgcgccgctcatcgcc
cccatggatccctatgatcttacatctgtggatctggccaattttttactcgaaccgtca
tggatggacaacggggtgtccgcctttcctttgggaacggatgaccagggtcggggaatt
ctttccacgattctttacgggttgaggacttcgctgatcgtcggtgggtccgttgttacc
atttcaagtattatcggtattgtcctgggcatgcttggtgcctattacggtggcatcctc
gatgccttcatcatgcgggctgccgataccgtcttttcattttccactaccctgcttgcc
gttctgcttcttggggttttcgagagcaggggggttttcaccgttattctcgccatctgt
attgccgattgggtgaagtacgcccggaccatacggggaagtgtccttgagatcaaggaa
tatccctatgtaactgcagcaaggtcctctggggctggggattttcgtattcttttcagg
catattctgcccaatgctctgccaccgatttttgtggttatggcggtggacatggcagta
gttatcatgcttgaggcaacattaagctttcttggggtgggtgttcctcttacggaacct
tccctcggaatgatgatcgccatcggaaagaattatatttacgcgggtatgtggtggatg
gtcgtttttccaggtgccacacttattgccatggtggttggtattaacctctttgctgac
tggctacgggaagagttgaacccgaaactgtag
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