Desulfarculus baarsii: Deba_0280
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Entry
Deba_0280 CDS
T01284
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dbr
Desulfarculus baarsii
Pathway
dbr00550
Peptidoglycan biosynthesis
dbr01100
Metabolic pathways
dbr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Deba_0280
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Deba_0280
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dbr01011
]
Deba_0280
Enzymes [BR:
dbr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Deba_0280
Peptidoglycan biosynthesis and degradation proteins [BR:
dbr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Deba_0280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ADK83656
UniProt:
E1QGE4
LinkDB
All DBs
Position
313450..315429
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AA seq
659 aa
AA seq
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MGAWGEKRARRGLSRNKAIDPGEIPQVRRALFAAAALVGLAMAVLVGRLWYLQVLHGEEF
RLLSENNRVRLVDVPPSRGLIFDCKRRLLADNRPTFTLVAVPEDVPDWDLLTRRLHALIG
ITPQEVADARKAARGAPPFKAMRLRSNLDRDQLANLETFQYELPGVKVMVEYRRAYLAAK
ETAHVIGYLGEINAEELKKAPRELYRMGDYVGRDGLERSRDRVLHGARGVRQVEVDAVGR
ELKVLSDKPERPGHDLILTLDLDLQKAAAVGMGQQVGAVVALNPKNGQVLCMYSAPSFDQ
NSFVLGMSGAQWQALSKDPMHPLKHRAISGVYPPGSTYKIITSAAGLSEGVINKDTLYFC
SGQMSLGRRTYKCWAHKRGGHGSVNLHKALRESCDVYYYRVGKSLGVDRLAKYARAFGLG
RASGVPLPHESSGLIPDSAWKRKRFGEPWQEGETLSVAIGQGFNLTTPLQLARMVAVVAN
GGRLVTPTLVAAVVRPDGGEPVPEPPGMISRTPVSDEHLKLIHEGLVAVVNEPHGTASRA
RVKGVTVAGKTGTAQVVALKFERKKGEETPWRFRDHALFVAYAPAEDPEIAVSVVIEHGG
HGGSDAAPVAQRVLATYFHGPQPLPEDEAAKAAEAAGRPAGQGTTGQPAAPEAEGVDGD
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcctggggcgaaaagcgcgcgcgccgcggcctgagccgcaacaaggccatcgac
cccggtgagattccccaggtgcggcgggcgctttttgccgcggcggcgttggtgggcctg
gccatggccgtgctggtggggaggctgtggtacctgcaggtgctgcacggcgaggagttt
cgcctgcttagcgaaaacaatcgcgtgcgcctggtggacgtgccgcccagccgcggcctg
atcttcgactgcaagcgccgcctgctggccgacaaccggcccaccttcaccctggtggcc
gtgcccgaggacgtgccggattgggatctgctgacccgacgcctgcacgccctgatcggc
atcacgccccaggaggtcgccgacgcccgcaaggccgcccgcggcgcgccgccgttcaag
gccatgcgcctgcgctccaacctggaccgcgaccagttggccaacctggagacgtttcaa
tacgagctgcccggcgtcaaggtgatggtggagtatcgccgggcctatctggcggccaag
gagacggcccacgtcatcggctacctgggcgagatcaacgccgaggagctgaaaaaggcc
ccgcgcgagctttatcgcatgggcgactacgtgggccgcgacggcctggagcgcagccgc
gaccgggtgctgcacggcgcgcgcggcgtgcgtcaggtcgaggtcgacgccgtcggccgc
gaactgaaggtcctcagcgacaagcccgagcggcccggccacgacctgatcctgaccctg
gacctggatctgcaaaaggccgcggccgtgggcatgggccagcaggtcggggcggtggtg
gccctcaaccccaaaaacggccaggttctgtgcatgtattcggcccccagcttcgaccag
aactccttcgtgctgggcatgagcggcgcccagtggcaggccctgtccaaggatcccatg
cacccgctcaagcaccgggccatcagcggcgtctatccgccgggctcgacctacaagatc
atcacctcggcggccgggctcagcgaaggggtcatcaacaaggacacgctctatttctgc
tcgggccagatgtcgctgggccggcgcacctacaagtgctgggcccacaagcgcggcggc
cacggcagcgtcaacctgcacaaggccctgcgcgagtcgtgcgacgtctattactatagg
gtgggcaaaagcctgggcgtcgaccgtctggccaaatacgcccgggcctttggcctgggc
cgcgccagcggcgtgccgctgccccacgaatcatcggggttgatccccgacagcgcctgg
aagcgcaagcgtttcggcgagccgtggcaggagggcgaaaccctttcggtggccatcggc
cagggtttcaacctgaccacgcccctgcaactggcgcgcatggtcgcggtggtggccaat
ggcggccggctggtgacgcccacgctggtggcggcggtggtgcggcccgatggcggcgag
ccggtgcccgagccgccgggcatgatcagccggacgcccgtctccgatgagcacctgaag
ctgattcacgaaggcctggtggcggtggtcaacgagccccacggcacggcgtcgcgggcg
cgggtcaagggggtgaccgtggccggcaagaccggcacggcccaggtggtggccctgaag
ttcgagcgcaaaaaaggcgaggaaacgccgtggcgcttccgcgatcacgcccttttcgtg
gcctacgccccggccgaggatccggagatcgccgtgtccgtggtgatcgagcacggcggc
cacggcggctccgacgccgccccggtggcccagcgggtgttggccacctattttcacggc
ccacagccgctgccggaggacgaggcggccaaggcggcggaggccgccgggcggccggcg
gggcaggggacgacgggccagccggcggccccggaggcggagggagtcgacggtgattga
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