Desulfarculus baarsii: Deba_0298
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Entry
Deba_0298 CDS
T01284
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dbr
Desulfarculus baarsii
Pathway
dbr00061
Fatty acid biosynthesis
dbr00071
Fatty acid degradation
dbr01100
Metabolic pathways
dbr01212
Fatty acid metabolism
dbr02024
Quorum sensing
dbr04146
Peroxisome
Module
dbr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Deba_0298
00071 Fatty acid degradation
Deba_0298
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Deba_0298
09145 Cellular community - prokaryotes
02024 Quorum sensing
Deba_0298
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dbr01004
]
Deba_0298
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dbr04147
]
Deba_0298
Enzymes [BR:
dbr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Deba_0298
Lipid biosynthesis proteins [BR:
dbr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Deba_0298
Exosome [BR:
dbr04147
]
Exosomal proteins
Exosomal proteins of breast milk
Deba_0298
Exosomal proteins of breast cancer cells
Deba_0298
BRITE hierarchy
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADK83674
UniProt:
E1QDN8
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All DBs
Position
complement(339082..340866)
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AA seq
594 aa
AA seq
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MCAIMAPRFVAGAAFYDAAFWQCYQRLGYPRQWLEQGQAIEPHLSYVVSHPSWYMEEVPA
PPLISIYELFARTVAAHRDEIAVVFMDKAITYGQLDDLISRYAGWLTALGLGRGDVAAAM
LPNSLQHVIAFYGAAKAGVTHCPINVMYQADEVAYQLKDCGAKAIVALDLLYDKIRPSAG
QLQGALVTNIKDWAADDCVVPAAIKFLWDIPKTPVDGAADFFATLAQAAPLAQAAPCAPN
DDVALLLYTAGTTGKSKGVIETHFNMVYNSLTHTHAFRTWGPREVNFSIMPMFHTAGYFL
HLLPVFYQGGTVIPIPMFDVADCFRIIETYGVNVIFAPPTLFIALLQRPELVAASDLSSI
KVTIGCGAPVPPALQEQWEAATGARLVNGWGMTETNSGGIISTPGIKDNITAIGVPLFSE
VLIVGDDGKPAPRGQQGEIWYRGLQLARGYLNKPQQTAEAFLPDGWFRTGDRGYVDEADF
VHFVDRIKDLIVASGYNVAPVEIEDVLYQHPAVAEAAVIGVADAYRGETIKAYVVLKAEA
AEVDEAALLAHCKERLATFKAPRQVEIRQQLPKSAVGKILRRVLREEHEREAAR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcgatcatggccccccggttcgtggctggcgcggcgttttacgacgcggcgttt
tggcaatgctaccagcgcttgggttatccccggcagtggttggagcagggccaggccatc
gagccccacctttcgtacgtggtctcgcaccccagttggtacatggaggaggttcccgcg
ccgccgctgatttccatctacgagcttttcgcgcggacagtggccgcccaccgcgacgag
atcgccgtggtgttcatggacaaggccatcacctacggccagctcgacgatttgatcagc
cgctacgccggctggctgaccgctctgggcctgggccgcggcgacgtggcggcggcgatg
ctgcccaattcgctgcaacacgtcatcgccttttacggcgcggccaaggccggcgtgacc
cattgcccgatcaacgtgatgtaccaggccgacgaggtggcctatcaattgaaagactgc
ggggccaaggccatcgtggcgctggatctgctctacgacaagatccgcccgtcggcgggt
caactgcagggcgcgctggtgaccaacatcaaggactgggcggccgacgattgcgttgtt
ccggcggcgataaagttcttgtgggatatccccaaaacgccggtggatggcgcggccgac
tttttcgcgaccctggcccaggccgcgcccctggcccaggccgccccttgcgcgcccaac
gacgacgtggccctgctgctctacaccgccggcaccaccggcaaatccaagggcgtcatc
gaaacccacttcaacatggtctacaactcgctgacccacacccacgcctttcgcacctgg
ggcccccgcgaggtcaatttctcgatcatgccgatgtttcacacggccggctatttcctg
catttactgccggtgttttatcagggcggcacggtgatccccatccccatgttcgacgtg
gccgactgtttccgcatcatcgaaacatacggcgtcaacgtgattttcgcgccgcccacc
ttgttcatcgccctgttgcagcggcccgagctggtggcggccagcgatctgtcgagcatc
aaggtgaccatcggctgcggcgcgccggtgccgccggccttgcaggagcagtgggaggcg
gccacgggcgcgcggctggtcaatggctggggcatgaccgagaccaacagcggcggaatc
atcagcacgccgggcatcaaggacaacatcacggccatcggcgtgccgttgttttcggag
gtgctgatcgtcggcgacgatggcaagccggcgccgcgcggccagcagggcgagatatgg
tatcgcgggttgcaattggccaggggctatctgaacaagccccagcagacggccgaggcc
tttctgcccgacggctggtttcgcaccggcgaccggggctacgtggacgaggccgatttc
gtgcattttgtcgatcgcatcaaggacttgatcgtggcctcgggctacaacgtggccccg
gtggagatcgaggacgtgctctatcagcatccggcggtggccgaggccgcggtgatcggc
gtggccgacgcctatcgcggcgagacgatcaaggcctacgtggtgttgaaagccgaggcc
gccgaagtggatgaggcggcgctattggcccactgcaaggagcgcctggccaccttcaag
gcgccgcgccaggtggagatccgtcagcaactacccaaaagcgcggtgggcaagatcctg
cggcgggtgctgcgcgaggagcacgagcgggaagcggcgcgctga
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