Desulfarculus baarsii: Deba_0431
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Entry
Deba_0431 CDS
T01284
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dbr
Desulfarculus baarsii
Pathway
dbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Deba_0431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dbr03019
]
Deba_0431
03009 Ribosome biogenesis [BR:
dbr03009
]
Deba_0431
Enzymes [BR:
dbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Deba_0431
Messenger RNA biogenesis [BR:
dbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Deba_0431
Ribosome biogenesis [BR:
dbr03009
]
Prokaryotic type
rRNA helicases
Deba_0431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ADK83805
UniProt:
E1QE19
LinkDB
All DBs
Position
490775..492496
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AA seq
573 aa
AA seq
DB search
MLTYFAAQVRSTMDAPGFDQLGLSPLLTAAVTEQGFTSPTPIQTAMIPLMLEGRDVIGQA
QTGTGKTAAFGLPLLHNISPGVGQAQALVLAPTRELAIQVAEALQGYGRKMGARVMAVYG
GAPYGLQISRLRKGVDVVVGTPGRVLDLIGQKALRLDMVETVVIDEADEMLSMGFIADIQ
AILEATPSQRQTALFSATLPPAIRQMSQSYMVEPQSVSVSPRQLTVEAVEQRYYLLDERD
KLAALCRLLEVEPVASALIFCRTKAGTGQLADELSARGFAAEAINGDLSQEARIRVLGRF
RNNQLKLLVATDVAARGLDIDDISHVINFDPPQDPEVYVHRIGRTGRAGRDGVAISLLSP
KDRWLLARIEAYAKARLSHCTLPTPEEIMAHREGRLLERMVALLDDGGFAREKGLAAKLE
AQGHDLADIAAAALKLARGQEKTRTIDPVAEYSLTRPPRGRQPYPARDQRRGDSRRFDDR
RQDDHRRVGETTAQPESGMVRLCLGMGRADGINAGHVLGSLSHHAEIPGRCIGKIRIQDT
RTLVDVSEQVVGRVLAKAAGYRIGRTPISVELA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttgacttatttcgcagcgcaagttaggagcaccatggacgcccctggattcgaccag
ttgggtctgagcccccttttgaccgccgccgtgaccgagcagggcttcaccagccccacg
ccgatccagacggcgatgatccccctcatgctggaaggccgcgacgtcatcggccaggcc
cagaccggcaccggcaagaccgccgcctttggcctgccgcttctgcacaacatcagcccc
ggcgtgggtcaggcccaggccctggtgctggcccccacccgcgagctggccatccaggtg
gccgaggccttgcagggctatggccgcaagatgggcgcgcgggtgatggccgtctatggc
ggcgcgccctatggcctgcaaatcagccgcctgcgcaagggcgtggacgtggtggtgggc
acgcccggccgcgtgctggacctgatcggccaaaaggctctgcgcctggacatggtcgag
acggtggtcatcgacgaggccgacgagatgctcagcatgggcttcatcgccgacatccag
gccatcctggaggccacgccgtcccagcgccagacggccttgttttcggcgacgttgccg
ccggccattcgccaaatgtcccaaagttacatggtcgagccccagagcgtcagcgtcagc
ccgcgccagctcaccgtcgaggccgtcgagcaacgctattatctgctcgatgagcgcgac
aagctggccgccctctgccgtctgctggaggtcgaacccgtcgccagcgccctgattttc
tgccgcaccaaggccggcacgggccagttggccgacgagctttcggcgcggggtttcgcg
gccgaggccatcaacggcgacctgagccaggaggcgcgcatccgcgtgctgggccgcttc
cgcaacaatcagctcaagctgctggtggccaccgacgtggccgcccggggcctggacatc
gacgacatcagccacgtcatcaacttcgatccgccccaagaccccgaggtctacgtccac
cgcatcggccgcaccggccgggccgggcgcgacggcgtggccatctctttgctttcgccc
aaggaccgctggctgctggcgcgcatcgaggcctacgccaaggcccgcctgagccattgc
accctgcccacgcccgaagagatcatggcccaccgcgagggtcggctcttggagcgcatg
gtcgccctgctcgacgacggcgggttcgcccgcgaaaaaggcctggccgccaagctggag
gcccagggccacgacctggccgacatcgccgccgccgccctcaagctggcccgcggccaa
gaaaaaaccagaaccatcgacccggtggccgagtactcgttgacccgtccgcccaggggc
cgccaaccctacccggcccgcgatcagcgccgtggcgattcacgccgcttcgatgaccgc
cgccaggacgaccaccgccgggtcggcgagacgaccgcccagcccgagagcggcatggtg
cgcctgtgcctgggcatgggccgggccgatggcatcaacgccggccatgtgctgggctcg
ttgtcccaccacgccgagattcccggccgctgcatcggcaagatccgcatccaggacacg
cggacgctggtggatgtctccgagcaggtggtgggccgcgtgctggccaaggccgctggt
tatcgcatcggacgcacgccgatcagcgtcgaactggcttag
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