Desulfarculus baarsii: Deba_0496
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Entry
Deba_0496 CDS
T01284
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dbr
Desulfarculus baarsii
Pathway
dbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Deba_0496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dbr03019
]
Deba_0496
03110 Chaperones and folding catalysts [BR:
dbr03110
]
Deba_0496
03029 Mitochondrial biogenesis [BR:
dbr03029
]
Deba_0496
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dbr04147
]
Deba_0496
Enzymes [BR:
dbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Deba_0496
Messenger RNA biogenesis [BR:
dbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Deba_0496
Chaperones and folding catalysts [BR:
dbr03110
]
Heat shock proteins
HSP60 / Chaperonin
Deba_0496
Mitochondrial biogenesis [BR:
dbr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Deba_0496
Exosome [BR:
dbr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Deba_0496
Exosomal proteins of other body fluids (saliva and urine)
Deba_0496
Exosomal proteins of breast cancer cells
Deba_0496
Exosomal proteins of colorectal cancer cells
Deba_0496
Exosomal proteins of bladder cancer cells
Deba_0496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
divDNAB
Motif
Other DBs
NCBI-ProteinID:
ADK83868
UniProt:
E1QE82
LinkDB
All DBs
Position
complement(567889..569532)
Genome browser
AA seq
547 aa
AA seq
DB search
MAKELKYDVKAREAIMRGVDTLANAVKVTLGPKGRNVIIDKSFGSPIITKDGVTVAKEIE
LENKFENMGAQMVKEVASKTSDVAGDGTTTATILAQAIYREGSKLVAAGHNPMAIKRGID
KAVEAVVAALRKLSKTTKDQKEIAQVGTISANNDATIGNIIAEAMNKVGKEGVITVEEAK
SMETTLEVVEGMQFDRGYLSPYFVNDPEKMVANIDDPLILIHEKKISSMKDLLPILEQVA
KMNRPLLIVSEDVEGEALATLVVNKLRGTLNACAVKAPGFGDRRKAMLEDIAILTGGTVI
SEDLGIKLENASLKDLGTAKRVTVDKDNTTIVDGGGERSKLEGRVKTIRAQIEETTSDYD
REKLQERLAKLIGGVAVINVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVALLR
CQEAIAAAGLEGAESFGANIIRRAIEEPLRQIAENAGLEGSVVVQKVKETSGTVGYNAQD
DKYEDLLEAGVIDPTKVTRFALQNAASVAGLLLTTECMIAEKPEEKGAGAPAMPGGMGGM
GGMGGMY
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaacttaaatacgacgtcaaggcccgcgaagcgatcatgcgcggcgtggac
accctggccaacgccgtcaaggtcaccctgggccccaagggccgcaacgtcatcatcgac
aaaagcttcggctcgccgatcatcaccaaggacggcgtgaccgtggccaaagagatcgag
cttgagaacaagttcgagaacatgggcgcccagatggtcaaggaggtcgcctccaagacc
tccgacgtggccggcgacggcaccaccaccgccaccatcctggcccaggccatctaccgc
gaaggctccaagctggtcgccgccggtcacaaccccatggccatcaagcgcggcatcgac
aaggccgtcgaggccgtggtcgctgccctgcgcaagctgtccaagaccaccaaggaccag
aaggaaatcgcccaggtcggcacgatcagcgccaacaacgacgccaccatcggcaacatc
atcgccgaggccatgaacaaggtcggcaaggaaggcgtgatcacggtcgaggaagccaag
agcatggagacgacgctggaagtcgtcgagggcatgcagttcgaccgcggctacctgagc
ccctactttgtcaacgatcccgagaagatggtcgccaacatcgacgatccgctgatcctg
atccacgagaaaaagatcagctcgatgaaagacctgctgcccatcctcgagcaggtggcc
aagatgaatcgcccgctgttgatcgtctccgaggacgtcgagggcgaggccctggccacg
ttggtggtcaacaagctgcgcggcaccctcaacgcttgcgccgtcaaggcccccggcttc
ggcgaccgccgcaaggccatgctcgaagacatcgccatcctcaccggcggcacggtcatc
agcgaagacctgggcatcaagctggaaaacgccagcctcaaggacctgggcaccgccaag
cgcgtcaccgtcgacaaggacaacaccaccatcgttgacggcggcggcgagcgctccaag
ctcgaaggccgggtcaagaccatccgcgcccagatcgaggagaccaccagcgactacgac
cgcgagaagctgcaagagcgcctggccaagttgatcggcggcgtggccgtgatcaacgtc
ggcgcggccaccgagaccgagatgaaagaaaagaaggcccgcgtcgaggacgccctcaac
gccacccgcgcggccgtcgaggaaggcatcgtgcccggcggcggcgtggccctgctgcgc
tgccaggaagccatcgcggcggccggcctcgaaggcgccgagtcctttggcgccaacatc
atccgccgggccatcgaggagcccctgcgccagatcgccgaaaacgccggcctggagggc
tcggtggtggtgcagaaggtcaaggagaccagcggcaccgtgggctacaacgcccaggac
gacaagtacgaagacctgctggaggccggcgtcatcgacccgaccaaggtcacccgcttc
gccctgcagaacgccgccagcgtggccggcctgctgctgaccaccgagtgcatgatcgcc
gaaaagcccgaggaaaagggcgccggcgctccggccatgcccggtggcatgggcggcatg
ggcggcatgggcggcatgtactaa
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