Desulfarculus baarsii: Deba_0596
Help
Entry
Deba_0596 CDS
T01284
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dbr
Desulfarculus baarsii
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dbr01011
]
Deba_0596
Enzymes [BR:
dbr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Deba_0596
Peptidoglycan biosynthesis and degradation proteins [BR:
dbr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Deba_0596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM_RLK
LysM3_LYK4_5
LysM2_NFP
DUF6491
Motif
Other DBs
NCBI-ProteinID:
ADK83968
UniProt:
E1QEI2
LinkDB
All DBs
Position
677847..679688
Genome browser
AA seq
613 aa
AA seq
DB search
MRKKLIVSLVVAVLALSGCATTQQRGDHASGKTCPPVNQQEQIKAGIAEELEALGEPEVV
SKKPAPDECDPNKVEYDIPITINAEVEQGIDLFQNKIPKRFRMWLERSGRYIPMMRSVLR
QYGLPEDLVYLALIESGFNCNAYSTAAAVGPWQFIAGTGKRFGLRIDYWVDERRDPVKST
HAAAQYLGDLYAEFGSWYLAAAAYNAGEGKIRRALKKYNANNFWSISRHHRDYLKDETRQ
YVPRMIAAAIIAKSPEKFGFNDLKYWPPMQFDEVRVHPGTSLDVAAKLAGVKNSELKALN
PELRRWCTPPSGKYTLKIPFGARAQFEQGYAKLAPKDRQAHTGVAAVRVRRGDTLGRIAK
THHMRLSDLVALNPKVKPNSLRVGQKIIVSPGRGAVAYAEADAPVVSSRRRASLSASSTV
PPARQGTRKIVYKVKPGDSLWDIAQGYNLDWHDVRRWNGQRSGNIQAGDRLVLYVPQSKA
EAKRATAKAQSRTYVVRRGDNLWEIAQAHGVSTADIKRWNKMRGNRLEVGDRLTIHKSSP
SKIATGNGQLVVASADESGVNDSSAGPEKTYRVRKGDTLSGISRRFNVSASKLRRLNSLR
GDNIRVGDTLRVQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaaaactgattgtcagtctggtcgtcgcggtcttggccttgtcgggttgcgcc
acgacgcaacagcgcggagaccatgcctcggggaagacttgcccgccggttaaccagcag
gagcagatcaaggccggcatcgccgaggagctcgaagcccttggcgagcccgaggtcgtc
tccaaaaaacccgcccccgacgaatgcgaccccaacaaggtcgaatacgacatccccatc
accatcaacgccgaggtcgagcagggcatcgacctgttccagaacaaaatccccaaacgt
ttccgcatgtggctggagcgctcgggtcgctacatccccatgatgcgtagcgtcctgcgg
caatacggcctgcccgaggatctggtctatctggcgctgatcgagagcggcttcaactgc
aacgcctactccaccgccgcggcggtggggccgtggcagttcatcgccggcacgggcaag
cgtttcggcctgcgcatcgattattgggtcgacgagcgccgcgacccggtcaagagcact
cacgccgccgctcaatacctgggcgacctctacgccgagttcggctcgtggtacctggcc
gccgccgcctacaacgccggcgagggcaagatccgtcgcgccctgaaaaaatacaacgcc
aacaacttctggtccatcagccggcaccaccgcgactacctcaaggacgagacccgccaa
tacgtcccgcgcatgatcgccgcggccatcatcgccaaaagccccgagaagttcggcttc
aacgacctcaaatattggccgccgatgcagttcgacgaggtgcgggtccaccctggcacc
agcctggacgtggccgccaagttggccggcgtcaaaaacagcgagctgaaggccctcaac
cccgagctgcgtcgctggtgcacgccgcccagcggcaaatacacccttaagattccgttt
ggggccagggcccagttcgagcagggctacgccaagctggcgcccaaggatcgccaggcc
cacaccggcgtggccgccgtgcgcgtgcggcggggcgacaccctgggccgcatcgccaag
acgcaccacatgcgcctgtccgacctggtggccctcaaccccaaggtcaagcccaacagc
ctgcgcgtgggccaaaagatcatcgtctcgcccggccgcggcgcggtggcctacgccgaa
gccgacgcccccgtggtctcctcgcggcggcgggccagcctgtcggcctccagcaccgtg
ccgccggcccgccagggcacgcgcaaaatcgtctacaaggtcaagcccggcgactccctg
tgggacatcgcccagggctacaacctcgactggcatgacgtgcgccgctggaacggccag
cgttccggcaacatccaggccggcgaccgcctggtgctctacgtgccccagtccaaggcc
gaggccaagcgggccacggccaaggcccagagccgcacctacgtggtgcgccgtggcgac
aacctgtgggagatcgcccaggctcacggcgtcagcaccgccgacatcaagcgctggaac
aaaatgcgcggcaacaggctggaagtgggcgaccgcctgaccatccacaagtcctcgccg
tccaagatcgccacgggcaacggtcagttggtggtggcttccgccgacgaatccggcgtc
aacgactcttccgccggccccgaaaagacctaccgcgtgcgcaagggcgacaccctctcg
ggcatcagccggcgtttcaacgtctcggccagcaagctgcgccgcctcaacagcctgcgc
ggcgacaacatccgcgtgggcgacaccctgcgcgtgcaatag
DBGET
integrated database retrieval system
