Desulfarculus baarsii: Deba_0816
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Entry
Deba_0816 CDS
T01284
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dbr
Desulfarculus baarsii
Pathway
dbr03420
Nucleotide excision repair
dbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Deba_0816
03430 Mismatch repair
Deba_0816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dbr03400
]
Deba_0816
Enzymes [BR:
dbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Deba_0816
DNA repair and recombination proteins [BR:
dbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Deba_0816
MMR (mismatch excision repair)
Other MMR factors
Deba_0816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
HHH
RecR_HhH
DEAD
HHH_5
Nol11_C
Motif
Other DBs
NCBI-ProteinID:
ADK84187
UniProt:
E1QF51
LinkDB
All DBs
Position
921098..923323
Genome browser
AA seq
741 aa
AA seq
DB search
MSGAGESILGGLNPAQRQAVELLGRPVLVIAGAGSGKTRTLVHRVAHVVELGVDPREILL
LTFTRRAAAEMLARARQLNPACAAVGGGTFHSLCNRLLRRYAARAGLMPNFTIIDPADAE
HLVRGCIDELGLKGGKDERFPKPRTVFGLISASRNLELSLAELIQTREPHLWPISKEIER
IALAYAQAKQRQNQVDYDDLLFMAEALLRDNPDIQDDQRRRWRHVLVDEYQDTNAVQARL
LELICGPGQELMVVGDDAQSIYRFRGARIDNIFEFPERFAGAAVVKLERNYRSTQPILDL
TNAIIEGAGQRFDKRLFTELLEGPKPRLERPRDERGQSRLVRERIQKLLADGARPEDIAV
LFRAGRDSFDLERELTAEHLAYVKYGGLKFLEASHIKDVLAHLRVIANPLDFVSWQRALM
LLPGVGPTTAQQIVAHLALAAGPADFGPRLRACPQGKRSAPVRQLAELMDELSDPAAPPL
DKVEAALEYYEPFCREQYEDYPRRLRDLEELPGLARAFGSLEDMLAELVLDPPAAHAEEM
GGGRITLSTVHSAKGMEWPHVFVIWATDGRLPSSASLDDPDGLEEERRLLYVACTRAAKG
LLLVAPRESFNRFDGARDQELSRFLDDLPAAVMESSGGAVFGEAFTRLAAAAAPDETPVA
RPVAAPRAVKEPAGPKVGSVAGKMALLQYDRPFPVGEMVSHAKFGRGKVIGYRGDDKIMV
HFTGYGLKTLVLKFAGLQPAQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggggccggcgaaagcatcctgggcgggctcaacccggcccaacgtcaggccgtg
gagctgttgggccggccggtgctggtcatcgccggggccggcagcggcaaaacgcgcacg
ctggtccaccgggtggcccatgtggtcgaactgggcgtggacccgcgcgagatcctgctg
ttgaccttcacccgccgggccgccgccgagatgctggcccgcgcccgccagctcaacccg
gcctgcgcggccgtgggcggcggcacgttccattcgctgtgcaaccgtttgctgcgccgt
tacgccgcccgggccggcctgatgccaaacttcaccatcatcgacccggccgacgccgag
cacctggtgcgcggctgcatcgacgaactgggcctcaaaggcggcaaggacgagcgtttt
cccaagccgcgcacggttttcgggttgatcagcgcctcgcgcaacctggaactgagcctc
gccgagttgatccagacccgcgagccccatctgtggcccatctccaaggagatcgaacgc
atcgccctggcctacgcccaggccaagcaacggcaaaaccaggtcgattacgacgacctg
ctgttcatggccgaggccctgctgcgcgacaaccccgacatccaagacgatcagcgccgg
cgctggcgacacgtgctggtcgacgaataccaagacaccaacgccgtccaggcgcgcctg
ttggagctgatctgcgggccggggcaagagctgatggtcgtcggcgacgacgcccagagc
atctatcgctttcgcggggcgcgcatcgacaacatcttcgaattccccgagcgcttcgcc
ggcgcggccgtggtcaagctcgaacgcaactatcgctcgacccagcccatcctcgacctg
accaacgccatcatcgaaggggccggccagcgctttgacaagcgcctgttcaccgagctg
ctggagggccccaagccccgtctggagcggccccgcgacgagcgcggccagtcgcgcctg
gtgcgcgagcgcatccagaagctcttggccgacggcgcccgtcccgaggacatcgccgtg
cttttccgggccggccgcgactccttcgacctggagcgcgagctgaccgccgagcatctg
gcctatgtcaaatacggcgggctcaagttcctggaggcctcgcacatcaaggacgttctg
gcccatctgcgggtcatcgccaaccccctggatttcgtctcgtggcagcgggcgctgatg
ttgttgcccggcgtgggccccaccaccgcccagcagatcgtggcccatctggccctggcc
gctgggccggccgacttcggcccccggctgcgggcctgtccccagggcaaacgcagcgcg
cccgtgcggcagttggccgaactgatggacgaactcagcgatccggccgcgccgcccctg
gacaaggtcgaggccgcgctggaatattacgagcccttctgccgcgagcaatacgaagac
tacccccgccgcctgcgcgacctggaggaactgcccggcctggcccgggcctttggctcg
ctggaggacatgctggccgagctggtcctggacccgccggccgcccacgccgaggagatg
ggcggcggacggatcaccctctcgacggtgcattcggccaagggcatggagtggccccat
gttttcgtgatctgggccaccgacggccggctgccctcgtcggccagcctggacgacccc
gacggcctggaagaagaacgccgcctgctctacgtggcctgcacccgcgcggccaagggg
ttgctgctcgtcgcgcccagggagagcttcaaccgttttgacggcgcgcgcgaccaagaa
ctcagccgtttcctggacgatctgcccgcggcggtgatggaaagctccggcggcgcggtc
tttggcgaggccttcacgcgcctggccgcggccgccgcgcccgatgaaacgccggtcgcc
cggcccgtggccgcgccccgggcggtcaaagagccggccgggcccaaggtgggcagcgtg
gccggcaagatggccctgttgcaatacgatcgacccttcccggtgggcgagatggtcagc
cacgccaagttcggtcggggcaaggtcatcggctatcgcggcgacgacaagatcatggtc
cacttcaccggatatgggctcaaaaccctcgtgttgaaattcgccggcctgcaaccggcc
cagtga
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