Desulfarculus baarsii: Deba_0889
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Entry
Deba_0889 CDS
T01284
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
dbr
Desulfarculus baarsii
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dbr03021
]
Deba_0889
03009 Ribosome biogenesis [BR:
dbr03009
]
Deba_0889
Transcription machinery [BR:
dbr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Deba_0889
Ribosome biogenesis [BR:
dbr03009
]
Prokaryotic type
rRNA transcription factors
Deba_0889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NusA_N
KH_NusA_1st
KH_NusA_2nd
HHH_5
S1
KH_1
KH_NusA_C
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ADK84259
UniProt:
E1QFC3
LinkDB
All DBs
Position
1003857..1005167
Genome browser
AA seq
436 aa
AA seq
DB search
MSELRRMIDHVAREKGLDREILISTLEEAMQSAARRKLGSKVEVDVAYNDEIGEVEVFEF
KEVVEELTDPDTQIGFEDARRLDPDCELGDELGIKVETADFGRIAAQSAKQVIIQRMKDA
ERDIIFEDFKDRKGEIINGIVQRFDKGSIVVNLGRTEAILLAREQVPREGYRPGDRVRAY
VLDVKRVSRGPQIILSRTHPGFVEALFELEVPEIAEGIVTIEGVAREAGSRTKLGVSSSD
RDVDPVGACVGMKGSRVQAVVQELRGEKIDIIAYDSDPARYVVNALAPAEISRVVVDESN
NTMEVIVADEMLSLAIGRRGQNVRLASKLTGWKIDVKSESKYSESLRDGYRSLLDVVGVS
DIGADTLFQAGYASADALAYANAADLAALPGIDDERAQRLIDDARDYIQRRRQASDAARA
GGQAQREAPVAPAADE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactgagaaggatgatcgaccacgtcgccagggagaagggtctcgaccgcgag
atcctgatcagcaccctggaggaggccatgcaatcggccgcccggcgcaagttgggctcc
aaggtcgaggtggacgtggcctacaacgacgagatcggcgaggtcgaggtcttcgagttc
aaggaggtggtcgaggagctgaccgatcccgacacccagatcggcttcgaggacgcccgc
aggctcgaccccgactgcgaactcggcgacgaactgggcatcaaggtcgagaccgccgac
ttcggacgcatcgccgcccagagcgccaagcaggtgatcatccagcggatgaaggacgcc
gagcgcgacatcatcttcgaggatttcaaagaccgcaagggcgagatcatcaacggcatc
gtccagcgcttcgacaagggctccatcgtggtcaacctgggccgcaccgaggccattttg
ctggcccgcgagcaggtgccccgcgagggttaccgccccggcgaccgcgtccgggcctac
gtgctcgacgtcaagcgcgtctcgcgcgggccgcagatcatcctctcgcgcacccatccc
ggctttgtcgaggcgcttttcgagttggaggtgcccgagatcgccgagggcatcgtgacc
atcgagggcgtggcccgcgaggccggcagccgcaccaagctgggcgtcagctccagcgac
cgcgacgtggacccggtgggcgcctgcgtgggcatgaagggttcgcgggtgcaggcggtg
gtgcaggagctgcgcggcgaaaagatcgacatcatcgcctacgactccgacccggcccgt
tacgtggtcaacgccctggccccggccgagatcagccgcgtggtcgtggatgaatccaac
aacaccatggaagtgatcgtggccgacgagatgctctcgctggccatcggtcgccgcggg
caaaacgtgcgcctggccagcaaactgaccggctggaagatcgacgtcaagagcgagtcc
aagtacagtgagagcctgcgtgacggctatcgttcgctgctggacgtcgtcggcgtcagc
gatatcggcgccgacaccctgttccaggccggctacgcctcggccgacgccctggcctac
gccaacgccgccgacctggccgccttgccgggcatcgacgacgaacgggcccaacgcctg
atcgacgacgccagggactatatccagcgtcgtcgccaggccagcgacgcggccagggcc
ggcggccaggcccaacgcgaggctccggtcgccccggcggccgacgagtag
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