KEGG   Desulfarculus baarsii: Deba_0889
Entry
Deba_0889         CDS       T01284                                 
Name
(GenBank) transcription termination factor NusA
  KO
K02600  transcription termination/antitermination protein NusA
Organism
dbr  Desulfarculus baarsii
Brite
KEGG Orthology (KO) [BR:dbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dbr03021]
    Deba_0889
   03009 Ribosome biogenesis [BR:dbr03009]
    Deba_0889
Transcription machinery [BR:dbr03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     Deba_0889
Ribosome biogenesis [BR:dbr03009]
 Prokaryotic type
  rRNA transcription factors
   Deba_0889
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 S1 KH_1 KH_NusA_C KH_2 KH_KhpA-B
Other DBs
NCBI-ProteinID: ADK84259
UniProt: E1QFC3
LinkDB
Position
1003857..1005167
AA seq 436 aa
MSELRRMIDHVAREKGLDREILISTLEEAMQSAARRKLGSKVEVDVAYNDEIGEVEVFEF
KEVVEELTDPDTQIGFEDARRLDPDCELGDELGIKVETADFGRIAAQSAKQVIIQRMKDA
ERDIIFEDFKDRKGEIINGIVQRFDKGSIVVNLGRTEAILLAREQVPREGYRPGDRVRAY
VLDVKRVSRGPQIILSRTHPGFVEALFELEVPEIAEGIVTIEGVAREAGSRTKLGVSSSD
RDVDPVGACVGMKGSRVQAVVQELRGEKIDIIAYDSDPARYVVNALAPAEISRVVVDESN
NTMEVIVADEMLSLAIGRRGQNVRLASKLTGWKIDVKSESKYSESLRDGYRSLLDVVGVS
DIGADTLFQAGYASADALAYANAADLAALPGIDDERAQRLIDDARDYIQRRRQASDAARA
GGQAQREAPVAPAADE
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgagcgaactgagaaggatgatcgaccacgtcgccagggagaagggtctcgaccgcgag
atcctgatcagcaccctggaggaggccatgcaatcggccgcccggcgcaagttgggctcc
aaggtcgaggtggacgtggcctacaacgacgagatcggcgaggtcgaggtcttcgagttc
aaggaggtggtcgaggagctgaccgatcccgacacccagatcggcttcgaggacgcccgc
aggctcgaccccgactgcgaactcggcgacgaactgggcatcaaggtcgagaccgccgac
ttcggacgcatcgccgcccagagcgccaagcaggtgatcatccagcggatgaaggacgcc
gagcgcgacatcatcttcgaggatttcaaagaccgcaagggcgagatcatcaacggcatc
gtccagcgcttcgacaagggctccatcgtggtcaacctgggccgcaccgaggccattttg
ctggcccgcgagcaggtgccccgcgagggttaccgccccggcgaccgcgtccgggcctac
gtgctcgacgtcaagcgcgtctcgcgcgggccgcagatcatcctctcgcgcacccatccc
ggctttgtcgaggcgcttttcgagttggaggtgcccgagatcgccgagggcatcgtgacc
atcgagggcgtggcccgcgaggccggcagccgcaccaagctgggcgtcagctccagcgac
cgcgacgtggacccggtgggcgcctgcgtgggcatgaagggttcgcgggtgcaggcggtg
gtgcaggagctgcgcggcgaaaagatcgacatcatcgcctacgactccgacccggcccgt
tacgtggtcaacgccctggccccggccgagatcagccgcgtggtcgtggatgaatccaac
aacaccatggaagtgatcgtggccgacgagatgctctcgctggccatcggtcgccgcggg
caaaacgtgcgcctggccagcaaactgaccggctggaagatcgacgtcaagagcgagtcc
aagtacagtgagagcctgcgtgacggctatcgttcgctgctggacgtcgtcggcgtcagc
gatatcggcgccgacaccctgttccaggccggctacgcctcggccgacgccctggcctac
gccaacgccgccgacctggccgccttgccgggcatcgacgacgaacgggcccaacgcctg
atcgacgacgccagggactatatccagcgtcgtcgccaggccagcgacgcggccagggcc
ggcggccaggcccaacgcgaggctccggtcgccccggcggccgacgagtag

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