Desulfarculus baarsii: Deba_0895
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Entry
Deba_0895 CDS
T01284
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dbr
Desulfarculus baarsii
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dbr03016
]
Deba_0895
Enzymes [BR:
dbr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Deba_0895
Transfer RNA biogenesis [BR:
dbr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Deba_0895
Prokaryotic type
Deba_0895
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
DKCLD
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ADK84265
UniProt:
E1QFC9
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All DBs
Position
1010092..1011099
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AA seq
335 aa
AA seq
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MGRRRKVKALLRRSGVLVVDKPAGPTSHDLVNALRRRFRPERLGHTGTLDPFATGVLVLV
FNQATRLSDLLGGGPKAYEAELVLGRATDTGDVTGRVIEQAAAPALEWAQAEAAVAALVG
QRMQSPPAYSAAKHEGKPLYAYARAGKIVEKPARPITIYDARLLGLEAGLLRFAVQCSRG
AYVRVLGEDLARALGAPGCLSGLRRVASWPFGLDEAHGLEDALAWSPEELECQMLGLDQA
LARAGLPTVTLDDHAAWRLGQGQQLPAESLLAPGQGLDQASGPFMARDAAGGLVAVLRWL
EPEARAERAYETIRVFPAETDPRVEMTSASALGAE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgccgccgcaaggtcaaggcgctgttgcggcgctcgggggtgctggtggtcgac
aagcccgccgggcccaccagccacgacttggtcaacgccctgcgccggcgttttcggccc
gagcgcctgggccacaccggcaccttggacccctttgccacgggcgtgctggtgctggtg
ttcaatcaggccaccaggctaagcgacctgctgggcggcgggcccaaggcctacgaggcc
gagttggttctgggccgggccaccgacaccggcgacgtcaccggccgggtgatcgagcag
gccgcggcgcccgcgctggagtgggcccaggccgaggccgccgtggccgccctggtgggc
cagcgcatgcagagcccgccggcctactcggcggccaagcacgagggcaagccgctttat
gcctacgcccgcgccgggaaaatagtggaaaagccggcccggcccattacaatttatgat
gcgcgcctgctgggcctggaggcggggcttttgcgcttcgccgtgcaatgctcgcggggg
gcctacgtgcgggtgctgggcgaggatctggcgcgggcgctgggcgcgccgggctgcttg
agcggcctgcgccgcgtggcctcgtggccctttggcctggacgaagcccacggcctggag
gacgcgctggcctggtcgccggaggagctggagtgccagatgctcggcctggatcaggcc
ctggcgcgggccgggctgcccacggtgacgctcgacgaccacgccgcctggcgccttggc
cagggccagcaactgccggccgagtcgctcctggcccccggccaggggttggaccaggcc
agtgggccgttcatggcccgtgacgccgccggcgggctggtggcggtgctgcgctggctg
gagccggaggcgcgcgccgagcgggcctacgaaacaatcagggtttttcccgcggaaacg
gatccgcgggtggaaatgacatctgcgtcggccctcggggccgagtag
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