Desulfarculus baarsii: Deba_1042
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Entry
Deba_1042 CDS
T01284
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dbr
Desulfarculus baarsii
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dbr03016
]
Deba_1042
Enzymes [BR:
dbr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Deba_1042
Transfer RNA biogenesis [BR:
dbr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Deba_1042
Prokaryotic type
Deba_1042
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADK84410
UniProt:
E1QII7
LinkDB
All DBs
Position
complement(1167652..1168695)
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AA seq
347 aa
AA seq
DB search
MPRALPYVTADLPGVGGELKAEPSHFVVEELPLYAPDGQGEHIYVNLTRQGLTTKDVCRA
LAKALGLSEDAIGVAGQKDKHAITTQTFSAHLPDMPEETARQLIEANLSARVNWTSRHHN
KLKLGHLLGNRFRILLSRPDDGAQEKAAAVAQALARRGLPNFFGPQRFGLDGDNAAKGRQ
AVLGHGPRDKWLRKLLCSAYQSQLFNTWLSRRMADGLFDRLLIGDVAKKTDTGGIFNVED
PDAEQPRLDDGRITYTGPIYGGKMLWAKDEAGQRERQILAEEDIGEADFKRARLSGSRRP
ARLVLDELRVEPTDQGLAFDFALPKGSYATVVLREFMKSEPHAPQAD
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgccccgagcccttccctatgtcaccgccgatctgcccggcgtgggcggcgagttgaag
gccgagcccagccatttcgtggtcgaggaactgccgctctacgcccccgacggccagggc
gagcacatctacgtcaatctgacccgccagggcctgaccaccaaggacgtctgccgcgcc
ctggccaaggccctgggcctgagcgaggacgccatcggcgtggccggccaaaaggacaag
cacgcgatcaccacccagacgttctcggcccatctgccagatatgccagaagaaacggcc
cgacaactcatcgaggcgaacctgtcggcccgcgtcaactggaccagccgccaccacaac
aagctaaagctcggccatctgctgggcaatcgctttcgcatcctgctcagccggcccgac
gacggggcccaggaaaaggccgccgccgtggcccaggccctggcccgccgcggcctgccc
aacttctttggcccccagcgcttcggcctggacggcgacaacgccgccaagggccgccag
gccgtgctgggccacggcccacgcgacaaatggttgcgcaagctgttgtgttcggcctat
caatcgcagttgttcaacacatggctgagccggcgcatggccgacggccttttcgaccgc
ctgctgatcggcgacgtggccaagaaaaccgacaccggcggcatcttcaacgtcgaagac
ccggacgccgaacagccaaggctggacgacggccgcatcacctacaccgggccgatctac
ggcggcaagatgctctgggccaaggacgaggccggccagcgcgaacgccagattttggcg
gaagaagacatcggcgaggcggacttcaagcgagccaggctctcgggatcgcggcggccg
gcccggctggtcttggacgaactgcgcgtcgagcccaccgaccagggcttggccttcgac
ttcgccctgcccaagggctcctacgccacggtcgtgctgcgcgagttcatgaaaagcgaa
ccccacgcgccccaggccgactga
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