Desulfarculus baarsii: Deba_1132
Help
Entry
Deba_1132 CDS
T01284
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dbr
Desulfarculus baarsii
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dbr03032
]
Deba_1132
03400 DNA repair and recombination proteins [BR:
dbr03400
]
Deba_1132
Enzymes [BR:
dbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Deba_1132
DNA replication proteins [BR:
dbr03032
]
Prokaryotic type
DNA Topoisomerases
Deba_1132
DNA repair and recombination proteins [BR:
dbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Deba_1132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Lar_restr_allev
Zn_ribbon_PaaD
Toprim_4
DUF1272
Toprim_C_rpt
Motif
Other DBs
NCBI-ProteinID:
ADK84500
UniProt:
E1QIS7
LinkDB
All DBs
Position
1254956..1257376
Genome browser
AA seq
806 aa
AA seq
DB search
MPKNLLIVESPAKARTIGKYLGPDFIVKASVGHIVDLPPSELGVDLENGFQPHYRVIKGK
DKVIKELRAAAAKAGEIFLAPDPDREGEAIAMHIAQQLGRPLESYHRVLFHELTKSAIAK
AVAAPAKIDVDRYNSQQARRVLDRLVGYQISPLLWDKVKRGLSAGRVQSVSLRLVVERER
AIQAFEPQEYWTVTAMLQGQQPPPFAARLARLAGKKFDPKNEKEAMAGVTAIQGQRFVVE
KLTKRQRKQQPAPPFITSTLQQEAYRKLGFAPKYTMGLAQALYEGKQTSEGQMGLITYMR
TDSTRLAAEAVATVRALIAARYGQEYLPAKPNAYKSKANAQEAHEAIRPTNAALTPELLE
AYLSRDELRLYQLIWNRFVACQMAPAVYDQTQAEIVAGQGLLRASGQVLRFRGFTAVYVE
DRDEHGGDEARASAEAKDHDQALPPLPPLDEGQELALQGVEPKQHFTQPPPRFTEASLVR
ELEEQGIGRPSTYAAILSTIQEKDYVSKDQKRRLIPTELGYLVNDLLVECFPQIMEVGFT
AQLEGLLDQVEEGRQDWRGLLADFYGPFQQALGAAKTHMRQIKGKGVETDVKCPLCGKPM
AIRLGRNGEFLACSGYPECKSTSDFSRDEKGAIVLQEAAPDPGVACDKCGAAMVVKKGRF
GPFLACSAYPQCKNIMALGADGKPVAKPQPEATGEKCPKCGGELVIKPTRSGGRFISCAN
YPKCNYSKGLSTGVKCPKCGGELVEKRSRRGKPFYGCDNFPTCDYASWDRPIDEPCPQCG
HPFLVEKVGKKETVVRCPQPDCNFKK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaacctgcttatcgtcgaatcgccagccaaggcgcgcaccatcggcaaatac
ctgggcccggacttcatcgtcaaggcctcggtgggtcacatcgtcgatctgccgcccagc
gagcttggcgtcgacctggaaaacggctttcagccccattatcgggtgatcaagggcaag
gacaaggtcatcaaggagctgcgcgccgccgcggccaaggccggcgagatatttctggcc
cccgaccccgaccgcgagggcgaggccatcgccatgcacatcgcccagcaactgggccgg
cccctggaaagctatcaccgcgtgctctttcacgagctgaccaaaagcgccatcgccaag
gccgtggccgcgccggccaagatcgacgtcgatcgctacaacagccagcaggcccgccgc
gtgctcgaccgcctggtgggctatcaaatctcgccgctgttgtgggacaaggtcaagcgc
gggctcagcgccgggcgggtgcagtcggtgagcctgcgcctggtggtcgagcgcgaacgg
gccatccaggccttcgagccccaggagtattggacggtcacggccatgctccagggccag
caaccgccgcccttcgccgcccgcctggcccgcctggccggcaagaagttcgacccgaaa
aacgaaaaagaggccatggccggcgtgacggccatccaaggccagcgtttcgtggtcgaa
aagctgaccaagcgtcagcgcaagcagcaacccgcgccgcctttcatcaccagcaccctc
caacaggaggcctatcgcaagctgggcttcgcgcccaaatacaccatgggcttggcccag
gccctctacgaaggcaagcagaccagcgaaggccagatgggcctgatcacctacatgcgc
accgactccacccgcctggccgccgaggccgtcgccaccgtgcgggccctgatcgccgcg
cgctatggccaggaatatctgccggccaagcccaacgcctacaaatccaaggccaacgcc
caggaggcccacgaggccatccggcccaccaacgccgccctgacccccgagttgctcgag
gcctatctcagccgcgacgagctgcggctctatcagctcatctggaatcgcttcgtggcc
tgccagatggccccggccgtctacgaccagacccaggccgagatcgtcgccggccagggc
ctgttgcgggccagcggccaggtgctgcgtttccggggcttcacggccgtctatgtcgag
gaccgcgacgagcacggcggcgacgaggcccgggcctccgccgaggccaaggatcacgac
caggccctgccgcctttgccgccgctggacgagggccaggagttggccctgcaaggcgtc
gagcccaagcagcatttcacccagccgccgccgcgcttcaccgaggcctcgctggtgcgc
gagttggaagagcagggcatcggccggccctcgacctacgccgccatcttgtcgacgatc
caggaaaaagactacgtcagcaaggaccagaaacgccgcttgattcccaccgagttgggc
tacctggtcaacgacctgctggtggagtgttttccgcagatcatggaggtgggcttcacc
gcccagctcgaagggctgctggaccaggtcgaggaaggccgccaggactggcgcggcctg
ctggccgatttttatgggcccttccagcaggcccttggcgcggccaagacccacatgcgc
cagatcaagggcaagggcgtcgagaccgacgtcaaatgccccctctgcggcaagcccatg
gccatccgtctgggccgcaacggcgagtttctggcttgcagcggctatcccgagtgcaag
agcaccagcgacttcagccgcgacgaaaagggggccatcgtcctgcaagaggccgcgccc
gaccccggcgtggcctgcgacaagtgcggcgcggccatggtcgtcaaaaaagggcgtttc
gggccgtttctggcttgttcggcctatccccagtgcaaaaacatcatggccctgggcgcc
gacggcaagcccgtggccaaaccccagcccgaggccaccggtgaaaaatgccccaaatgc
ggcggcgagctggtgatcaagcccacccgctcgggcgggcggttcatttcctgcgccaat
taccccaagtgcaattattccaagggcctgtccaccggcgtcaaatgccccaaatgcggc
ggcgaactggtggagaaacgcagccgtcgcggcaagccattttatggctgcgataatttc
ccgacctgcgactacgcctcgtgggaccggcccatcgacgagccctgcccccagtgcggg
catccgtttttggtcgaaaaagtcggcaagaaagaaaccgtcgtccgctgcccccagccc
gactgcaatttcaagaaatag
DBGET
integrated database retrieval system
