Entry |
|
Name |
(GenBank) Smr protein/MutS2
|
KO |
K07456 | DNA mismatch repair protein MutS2 |
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Organism |
dbr Desulfarculus baarsii
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:dbr00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Deba_1279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:dbr03400]
Deba_1279
DNA repair and recombination proteins [BR:dbr03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Deba_1279
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1429887..1432322
|
AA seq |
811 aa
MRADEAARGLCCDEQTMAALELPELLAIVAGLTQSPLGATRARRLRPCNDLPTVARRLRR
LSQLCDLLDQSGPPSLDGLADVGPLLARLGAEGAFLTCPELERVAQFLSSVSSAAAFLDP
SESLFDELFRLRNSFMPMPDLAKRIRSVIGPGGSVASSASPELARVRREMGRARDSLRGQ
LNALFSQSGLGGVFSDQIVTQRADRFVVPVKVEMKSRLSGIIHDASGTGATCFVEPLEAV
EGNNRLALLRRQEHEEELRVLRETALEISFNLGALHEAQDALAKLDCLLAQAVFCRRLDC
AEPRLHAGDELELLKARHPLLAWRQAQGRGRVAPVGLSLGGACRTLIISGANAGGKTVAL
KTAGLITLMVMCGLRAPVEAGSRLPIFRQVMAEIGDDQDIDRELSTFSAHATRLAWMTRL
AGRGSLCLIDELGAATDPGEGAALGMAVLDWLRQKGALAMVTTHFHRLKAYAAAAEWTEN
ASVSFNQATGVPTYQLHYGAPGFSDALAVSRRLGFPPEVLARAEANLDSGERQTVALLQE
AESIRQQAAEERAKAGRERLAAEEERQKARLLLRQAREQKAGALAEGKRRVREVAARLEK
RLEELLGQAEQAKAADQPVKPGKLKQEVYQARREALEEVERVTAPPKADAPQAPVDAFAA
LKAGAAVRAIALDQKGVLLEDARPGAETVAVSVGVSGVRVMIPVNQLEPLGGAREDNRPK
PGVSVQVQAASGLDLNLVGLRVEEALDKVDKAVDQAVVAGRSRLCVVHGVGTGRLRAAVR
EFLRGHPFVAGVRQAEPRQGGAGVTVAELRE |
NT seq |
2436 nt +upstreamnt +downstreamnt
ttgcgcgccgacgaggccgcgcggggcttgtgctgcgacgagcaaaccatggccgccctg
gagctgcccgagttgctggctatcgtcgccggcctgacccagagccccttgggcgcgacg
cgcgcgcggcgtttgcggccgtgcaatgatttgcccacggtggcgcggcgtctgcgccgc
ctaagccaactgtgtgatctgcttgatcaatcaggcccgccaagcctcgatggcctggcc
gacgtggggccgctcttggcccggctgggggccgagggcgctttcctcacctgccccgaa
ttggagcgtgtggcccagtttcttagctcggtctccagcgccgccgcctttctcgacccc
agcgagagccttttcgacgagctatttcgcctgcgcaactccttcatgcccatgcccgac
ctggccaagcgcatccgctcggtgatcgggccgggcggttcggtggcctccagcgcctcg
ccggagctggcccgcgtccgccgcgagatgggccgggcccgcgacagcctgcgcggccag
ctcaacgccctgttcagccagagcggcctcggcggcgtgttttccgaccagatcgtcacc
cagcgggccgaccgcttcgtggtgccggtcaaggtcgagatgaaatcgcgcctgagcggc
atcatccacgacgcctcgggcacgggggccacctgtttcgtcgagccgctggaggcggtg
gagggcaacaatcgcctggccctgctgcgccgccaggagcacgaggaagagctgcgcgtg
ctgcgcgagacggccctggagatatccttcaacctgggcgccctgcacgaggcccaggac
gccttggccaagctggactgcctgctggcccaggccgtgttctgccggcggttggactgc
gccgaaccccgcctgcacgccggcgacgaactggagctgctcaaggcccggcatccgctg
ctggcctggcggcaggcccagggccgagggcgggtcgcgccggtgggcctgagcctgggc
ggcgcttgccgcacgctgatcatcagcggggccaacgccggcggcaagaccgtggccctc
aagacggctgggctgatcacgctgatggtcatgtgcggcctgcgcgcgcccgtggaggcc
ggcagccggctgccgatttttcgccaggtgatggccgagatcggcgacgaccaggatatc
gaccgcgagctttcgaccttcagcgcccacgccacgcgcctggcctggatgaccaggctg
gccggccgcggttcgctgtgcctgatcgacgaactgggcgcggccaccgaccccggcgag
ggcgcggccctgggcatggccgtgctggactggctgcgccaaaagggcgcgctggccatg
gtcaccacccattttcatcggctcaaggcctacgccgccgccgccgaatggaccgaaaac
gcttcggtttcgttcaaccaagccaccggcgtgccgacttatcaactgcattatggcgcg
ccgggcttcagcgacgccctggccgtcagccggcgtttgggctttccgcccgaggtgctg
gcccgggccgaggccaatctggattccggcgagcgccagaccgtggccttgctgcaagag
gccgagagcatccgccagcaggccgccgaggagcgcgccaaggccggccgggagcgcctg
gccgccgaggaggagcgccaaaaggcccgccttttgttgcgccaggcccgcgagcaaaag
gccggggccctggccgaaggcaaacgccgcgtgcgcgaggtggccgccaggctggaaaaa
cgcctggaagagctgctgggccaggccgagcaggccaaggccgccgatcagccggtcaag
ccgggcaagctcaaacaagaggtttatcaggcgcggcgcgaggcgttggaagaggtggag
cgggtgacggccccacccaaggccgatgcgcctcaagcgcccgtcgacgcctttgccgcc
ctcaaggccggcgcggcggtgcgggccatcgccctcgatcaaaagggcgtgctgctggag
gacgcgcggcccggcgccgaaacggtggctgtctcggtgggcgtcagcggcgtgcgggtg
atgatcccggtcaaccaactcgaaccactgggcggcgcgcgcgaggacaatcgccccaag
cctggcgtgagcgtgcaggtgcaggcggccagcgggctggatctgaacctggtgggcctg
cgggtcgaggaggccctcgacaaggtggacaaagccgtggaccaggccgtggtggctggc
cgaagcaggctgtgcgtggtgcatggggtgggcactggccggctgcgcgcggcggtgcgc
gagtttttgcgggggcatcccttcgtggccggggtgcgccaggccgaaccgcgtcagggc
ggggccggcgtcaccgtggccgagctgcgggagtag |