Desulfarculus baarsii: Deba_2613
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Entry
Deba_2613 CDS
T01284
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
dbr
Desulfarculus baarsii
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dbr03019
]
Deba_2613
Enzymes [BR:
dbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Deba_2613
Messenger RNA biogenesis [BR:
dbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Deba_2613
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
AAA_22
Helicase_C
AAA_16
PhoH
nSTAND3
UvrD-helicase
AAA_30
IstB_IS21
ATPase_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADK85967
UniProt:
E1QK74
LinkDB
All DBs
Position
2905117..2907852
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AA seq
911 aa
AA seq
DB search
MTAHRTKTTGRRPTAKGPPRRRPEKPVRDQEPSIHPKLLPVLEHIGVPQATAFAADPFQA
EAVEKLAEGDVVVSAPTGSGKTWIAEQAIAQALAQGQRAWYASPLKALSNAKYHEFGAIF
GPERVGILTGDRKENSQAPLIVGTTEILRNQLYDAMHRGENIDSSLVVLDEAHYLGDPDR
GVVWEEVIIYLPPRVRLLLLSATVENAEQLARWLMFVRGNQCRTVRSDQRPVPLFPVFMF
PDGELAPLKTRRGLLGKISHFLEQEARQPKGGRQINSTPQFANILSALDHAAMLPAIFFL
KSRADCDNALAHAAGARLAVDQAQGQRLNRFVDDFLAEYPFLADHPQLEPLRRLRVAAHH
AGHLPHWKLLVERLMQTGLLRAIFSTSTVAAGVNFPARTVVVTQSDRFNGREFVDLRATD
LLQMTGRAGRRGMDNIGFALIVPGPYQNVPLLAGLLNANPEPIESQLHINFSMALNLLLS
QRPAEIKQLLGCSLATFQRLERRGAKAAGEGGMAELMRQLAPLLAGSNCHGPEEAVVRRK
RRRQLDGLRRRLAHELESMEQEQGLWAALTRGRVFIDMFGAMAAVLRREGRGEDAGVLAV
SLIPDRRLQRGRPRLDFVPIDEIAGVFHEVIDLPVAGGGRVLAQAVLEQIPDAPRALSGP
ELENLGLRERDETKLRLQEVESQIDSLACVGCAIEGKCLHGGPEIEPLLQRAEQMLSQVR
EESHAFWYDFVRHLEFLRSEGFVDSQGGLTQDGLWASKLRLDQPVLIAQAIRSGALPQND
PVLLAALLALFVDDRERESDSPYLSQRLREGLATLLADIEPLLERLRQWGFHTPALPMPA
ASAMFAWALGQEFADVVALYGGAEGDLAALIYRTADNLRQIASLHDTHPALSASAREAVE
LLLRPPVVLPT
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgcccatagaacaaaaaccaccggccgacggccgaccgccaagggcccgccccgt
cgccggcccgaaaagcccgtgcgcgaccaggagccttcgatccaccccaagcttctgcct
gttctggagcacatcggcgtgccccaggccacggccttcgcggccgaccctttccaggcc
gaggccgtggaaaagctggccgaaggcgacgtggtggtcagcgcgcccacgggcagcggc
aagacctggatcgccgagcaggccatcgcccaagccctggcccagggccagcgggcctgg
tacgccagcccgctcaaggcgctttccaacgccaagtatcacgaattcggcgcgattttc
gggcccgagcgcgtgggcattctcaccggcgaccgcaaggaaaactcccaggccccgctg
atcgtcggcaccaccgagatcttgcgcaaccagctctacgacgccatgcaccggggagaa
aacatcgactccagtctggttgtgctggatgaggcccactatctgggcgacccggaccgt
ggcgtggtctgggaggaagtcataatctatctgccgcccagggtgcgcctgctgctactt
tcggccacggtggaaaacgccgaacaactggcccgctggctgatgttcgtgcgcggcaac
cagtgccgcaccgtgcgtagcgaccagcgtccggtgccgctgtttccggtgttcatgttc
cccgatggcgaactggccccgctcaagaccaggcgcggcctgttgggcaagatcagccat
tttctggaacaggaggcgcgccagcccaagggtggccgtcagatcaactccacgccccag
tttgccaatattttgtcggcgctggaccacgccgccatgttgccggccatatttttcctg
aaatcacgggccgattgcgacaacgccctggcccacgccgccggcgcgcgtctggccgtg
gatcaggcccaaggccagcgcctgaatcgttttgtcgacgattttttggccgagtatccg
tttttggccgatcacccccagttggagcccctgcgccgcctgcgggtggccgcccaccac
gccgggcacctgccccattggaagcttttggtcgagcgtctgatgcagacgggcctgctg
cgggccattttcagcacctccaccgtggccgctggcgtcaattttccggcgcggacggtg
gtggtcacccagtcggaccgcttcaacggccgcgagttcgtcgatctgcgggccaccgat
ctgttgcaaatgaccggccgggccggccgacggggcatggacaacatcggcttcgcgctg
atcgtgccggggccatatcaaaatgttcccctgctggccggcctgctcaacgccaacccc
gagcccatcgagagccaactgcacatcaatttttccatggccctcaacctgctgctttcg
cagcggccggccgagatcaagcagctcctgggttgcagcctggccaccttccagcgcctg
gagcggcgcggggccaaagccgccggcgaaggcggcatggccgaactgatgcgccaactc
gcgccgctgttggccggctccaactgccatggccccgaagaggccgtggtgcggcgcaag
cggcggcgtcagttggacggcctgcgccgtcgtctggcccacgaactggagtcgatggaa
caagagcagggcctgtgggccgccctgaccaggggtcgggtgttcatcgacatgttcggc
gcgatggccgcggtgctgcgccgcgaaggccgtggcgaggacgccggcgtgctggccgtc
agcctgatccccgatcgccgcttgcaacggggccggccccggctggacttcgtgcccatc
gacgagatcgccggcgttttccacgaagtgatcgacctgcccgtggccggcggcggccgg
gtcttggcccaggccgtgctggagcagatccccgacgccccccgggcgctaagcgggccc
gagttggaaaacctgggcctgcgcgagcgcgacgaaaccaagctccgcctgcaggaggta
gaaagccagatcgacagcctggcctgcgtgggctgcgccatcgagggcaaatgcctgcac
ggcggcccggagatcgagcccctgctgcaacgggccgagcagatgctctctcaggtgcgc
gaggagagccacgccttttggtatgatttcgtacggcatctggaatttttgcgcagcgag
ggctttgtcgacagccagggcggcctgacccaggacggcctgtgggccagcaagctgcgc
ctggatcagccggtgctcatcgcccaggccatccgctcgggggccctgccgcagaacgac
cccgtgctgctggcggcgcttctggccctttttgtcgacgaccgcgagcgcgaaagcgac
agtccctacctcagccagcgcctgcgcgagggcctggccaccttgctggccgacatcgag
cccctgctggagcgcctgcgccaatggggcttccacacgccggccctgcccatgccggcg
gcctcggccatgttcgcctgggccctgggccaggagttcgccgacgtggtggccctgtac
ggcggggccgagggcgacctggccgcgctgatctaccgcacggccgacaacctgcgccag
atcgcctcgctgcacgacacccacccggcccttagcgccagcgcccgcgaggcggtggag
ctcctgctgcggccgccggtggtgctgcccacctga
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