Desulfarculus baarsii: Deba_2668
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Entry
Deba_2668 CDS
T01284
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
dbr
Desulfarculus baarsii
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dbr03016
]
Deba_2668
Enzymes [BR:
dbr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Deba_2668
Transfer RNA biogenesis [BR:
dbr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Deba_2668
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
ADK86022
UniProt:
E1QKC9
LinkDB
All DBs
Position
2959664..2961007
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AA seq
447 aa
AA seq
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MHSADQRLKAHIATFGCQMNEYDSARMARMLGQMGYIAEADPQKADLVIFNTCSVRDKAE
QKLYSALGPLVKIKRQRDLIIGVTGCVAQQEGRRLLRRVAHLDFVLGTAQIDKLPELVHD
AAKGLRRAELSLKRASEPAPIVLPPQVGLSANVTVMRGCDNFCSYCVVPYVRGREQSRPA
DQVLEEIAALVAAGAREVVLLGQNVDSYRDPGRGIGFAELLRLAAGVEGLWRVRFLTSHP
KDLSPELIETLAAEPKVMEQMHLPIQSGDDSVLAAMNRGYTTGQYLAKVEALRRAAPEVT
LGGDIIVGFPGESADAFARTLELVERVGYDTLFCFIYSDRPFTKASRMTGKIDQDVKASR
VNQLLELHRRLGRERNRARVGTIREVLVEGPAKKGQGMLAGRDRGGLAVNFAGEAALVGT
IQRVLVTQGLTNSLIGRLAGQPEGGNR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtgccgaccaacgcctgaaggcccacatcgccaccttcggctgccagatgaac
gaatacgattcggcgcgcatggcccggatgctgggccagatgggctatatcgccgaggcc
gacccgcaaaaggccgacctggtgattttcaacacctgtagcgtgcgcgacaaggccgag
caaaagctctattcggccctggggcccctggtcaaaatcaagcgccagcgcgatctgatc
atcggcgtgaccggctgcgtggcccagcaggagggccggcggctgttgcggcgggtggcc
cacctggattttgttttgggcacggcccagatcgacaagctgcccgagttggtccacgac
gcggccaagggcctgcgccgcgccgaactgagcctcaagcgcgccagcgagccggcgccc
atcgtcctgccgccccaggtggggctttcggccaacgtgacggtgatgcgcggttgcgac
aacttttgcagctattgcgtggtaccatatgtcaggggccgcgaacagagccggccagcc
gatcaggtgctggaggagatcgccgcgctggtggccgccggcgcgcgagaggtcgtcctg
ctgggccagaacgtcgactcctaccgcgatccggggcgggggatcggcttcgcggagctg
ctgcgcctggccgccggcgtcgagggcctgtggcgggtgcgctttctgaccagccacccc
aaggatctctcgccggagctgatcgagaccctggccgccgaacccaaggtaatggagcag
atgcacctgcccatccagtcgggcgacgacagcgtgctggcggccatgaaccggggctac
acgaccgggcaatacctggccaaggtcgaggccttgcgccgggccgcgccggaggtgacc
ctgggcggcgacatcatcgtgggctttcccggcgaaagcgcggacgccttcgcgcggacg
ctggagttggtcgaacgggtgggctacgacacgctgttttgcttcatctactccgaccgg
cccttcaccaaggccagccgcatgaccggcaagatcgatcaagatgtcaaggccagccgg
gtcaatcagcttttggagctgcaccgtcgcctgggccgggagcgcaaccgggcgcgggtg
ggcacgatccgcgaggtgctggtggaagggccggccaaaaagggccagggcatgctggcc
ggccgcgatcgcgggggcctggcggtgaatttcgccggcgaggccgcgctcgtcggcacg
atccaacgggtgttggtcacccagggcctgaccaactcgctcatcggcaggctggccggc
cagccggaagggggcaatcgatga
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