Entry |
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Name |
(GenBank) DNA polymerase I
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KO |
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Organism |
dbr Desulfarculus baarsii
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:dbr00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Deba_2722
03410 Base excision repair
Deba_2722
03420 Nucleotide excision repair
Deba_2722
03440 Homologous recombination
Deba_2722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:dbr03032]
Deba_2722
03400 DNA repair and recombination proteins [BR:dbr03400]
Deba_2722
Enzymes [BR:dbr01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Deba_2722
DNA replication proteins [BR:dbr03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Deba_2722
DNA repair and recombination proteins [BR:dbr03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Deba_2722
NER (nucleotide excision repair)
GGR (global genome repair) factors
Deba_2722
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(3017692..3020364)
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AA seq |
890 aa
MPDKPTIFLLDASGYIHRAFHAVKGLATSDGVPTGAVFGFVNMLLKVLAEARPSHLAVVY
DAKGPTFRHQIFPAYKANRPPMDPALKAQLPLVRQLVTALCLPAVEMEGFEADDLMATLA
RQAREQGFEVVLVSADKDLLQLVGPGVSLWDTMKDLRLGPEEVRQKTGLPPELQVDMQAL
TGDASDNVPGVPGVGPKTAVKLLAEHPGLEAVLAAAPAMKKSKLRESLIENKDMALLSRR
LVRLRDDAPLRFEPAAFRVVEPDRDVLLPLLTRLEFNKLIKDFAAAGPRPQADYRRLTDL
DELARVLEQAKAAGQLAIDTETTSLDPIRADLVGFSLCVSPGLAYYAPLAHDWPADEPQA
PRRQALDLLGQALADPGLLKIGQNLKYDLNVLRRAGLSVAGPLFDTMVADYLLNPAKASH
GLEAIAAEHLGRGVIGFEEAVGGKGKGFAQAPPERAVPYAAEDADVALQAAQALGPKLDE
ADLRRLFDELEMPLTPLLAKMERYGVLIDAEELGRLSAELDQALAAGEQKIYALAGHEFN
INSTQQLGQVLFDELGLSQVKKTKKRTAYSTDMSVLAILAAQHPLPAEVLAYRANAKLKS
TYVDALPALINPDTGRVHTSFNQCVTATGRLSSSDPNLQNIPVRGELGRRMRGCFVPAPG
RLLVSADYSQIELRVLAHLSQDPLMLQDMAEGLDVHTQTAARIFDVMPGLVTREMRVRAK
TVNFGVLYGMSAFRLAREQGVSRAEAEDIIARYLGRYQGVARFQQQNLSQCRQRGYVTTI
LGRRRFLPAINSSDRQAREAAERVALNTPIQGSAADIIKLAMLRVDEMLTRHYPDSPMIL
QVHDELVFETPEGGVEQFAQAVRRCMEDVLKLDVELKVDVGWGRDWAQAH |
NT seq |
2673 nt +upstreamnt +downstreamnt
ttgccggataagccgacgatttttctgctggacgccagcggctacatccaccgcgccttc
catgccgtcaagggtctcgccaccagcgacggcgtgcccaccggcgcggtgttcggcttt
gtcaacatgctgctaaaggtgctggccgaggccaggcccagccatctggccgtggtctac
gacgccaagggccccaccttccgccaccagatcttcccggcttacaaggccaaccgcccg
cccatggacccggcgctcaaggcccagttgcccctggtgcgccagttggtcacggcgctg
tgcctgccggcggtggagatggaaggcttcgaggccgacgacctgatggccaccctggcc
cgccaggcccgcgagcagggcttcgaggtggttttggtcagcgccgacaaagacctgctt
cagctcgtcggtcccggcgtgagcctctgggacaccatgaaagacctgcgcctgggcccc
gaggaggtgcgtcaaaagaccggcctgccgccggagttgcaggtggacatgcaggccctg
accggcgacgcctccgataacgtgcctggcgtgcccggcgtgggccccaaaacggcggtg
aagcttctggccgagcaccccggcctggaggccgtgctggccgccgcgccggccatgaaa
aagtcaaagctgcgcgaaagtctcatcgaaaacaaagatatggccctgctcagccggcgg
ttggtgcgcctgcgcgacgacgcgccgctgcgcttcgagccggcggcctttcgggtcgtc
gagcccgaccgcgacgtgctcctgcccctgctgacccgcctggagttcaacaaactcatc
aaggacttcgccgccgccggccccaggccccaggccgattatcgccgcctgaccgatctg
gatgagctggcccgcgtcctggaacaggccaaggcggccggccaactggccatcgacacc
gagacgacctccctcgatcccatccgggccgatctggtgggcttttcgctgtgcgtcagc
cccggcctggcctactacgcgcccctggcccacgattggcccgccgacgaaccccaggcg
ccccgccgtcaggccctggatctgctgggccaggccctggccgacccagggctgctcaag
atcggccagaacctcaaatacgacctcaacgtattgcggcgcgccggcctgagcgtggcc
ggccccttgttcgacaccatggtcgccgattatctgctcaacccggccaaggccagccac
ggcctggaggccatcgccgccgagcacctgggccggggggtgatcggcttcgaggaggcc
gtgggcggcaagggcaagggctttgcccaggccccgcccgagcgggccgtgccctatgcc
gccgaggacgccgacgtggccctgcaagcggcccaggccctgggcccaaagctcgatgag
gccgatctgcgccgcttgttcgacgaactggagatgccgctgacgcccctgctggccaag
atggagcgctacggcgtgctcatcgacgccgaggaactgggccggctttcagccgagttg
gaccaggccctggccgcgggcgaacaaaaaatttacgccctggccggccacgagttcaac
atcaactcgacccagcaactgggccaggtgctctttgacgagttgggcctgagccaggtc
aaaaagaccaaaaagcgcacggcctattccaccgacatgagcgtgctcgccatcctggcc
gcccagcaccccctgccggccgaggtgttggcctaccgcgccaacgccaagctcaaaagc
acttacgtcgacgccttgcccgcgctgatcaacccggacactggccgcgtgcacaccagt
ttcaatcagtgcgtcaccgccaccggccggctttcgtcgtcggacccgaatctgcaaaac
atccccgtgcgcggtgaactgggccggcgcatgcggggctgcttcgtgcccgcgccgggg
cggcttctggtcagcgccgattattcgcagatcgaactgcgcgtgctggcccacctgtcc
caagacccgctgatgctccaggacatggccgaaggcctggacgtgcacacacagacggcc
gcgcgcatcttcgacgtcatgcccggcctggtcacccgcgagatgcgcgtccgggccaag
acggtcaacttcggcgtgctctacggcatgagcgcctttcgcctggcccgcgagcagggc
gtcagccgggccgaggccgaggatatcatcgcccgctatctggggcgttaccagggcgtg
gcccggttccagcagcaaaacctcagccagtgccgccagcggggctacgtcaccacgatc
ctgggccggcggcgttttttgccggccatcaactccagcgaccgccaggcccgcgaggcc
gccgaacgcgtggctctcaacacgcccatccagggttcggcggccgacatcatcaagctg
gccatgctgcgcgtcgacgagatgctcacgcgccattaccccgattcgccgatgatcctc
caggtgcacgacgagctggtcttcgagacgcccgagggcggcgtggagcaattcgcccag
gccgtgcgccgctgcatggaggacgtgctcaagctcgacgtcgagctgaaggtggatgtg
ggctggggccgcgactgggcccaggcccactga |