| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase, beta' subunit
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| KO |
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| Organism |
dbr Desulfarculus baarsii
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:dbr00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Deba_2944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:dbr03021]
Deba_2944
03400 DNA repair and recombination proteins [BR:dbr03400]
Deba_2944
Enzymes [BR:dbr01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Deba_2944
Transcription machinery [BR:dbr03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Deba_2944
DNA repair and recombination proteins [BR:dbr03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Deba_2944
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(3241410..3245609)
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| AA seq |
1399 aa
MEDLYSYFAKPKDPLSFDAVKISLASPEKIRAWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPTKDYECNCGKYKRMKHRGVVCEKCGVEVIQSKVRRERMGHIDLATPVAHIWFMKSL
PSKVGNLLDLTLKELEKVLYFESFVIIEGGSTGLARGTLVTEERLRQLRDEYGDDFQAGI
GAEALQRMLSEIDLQTLYEELRAEMDATASEAKRKKLGKRLKVIDAFKESGNSPEWMIMD
IVPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLNELSAPEIIIRNEKRMLQ
EAVDVLFDNGRRGKTITGPNKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVIGPD
LRLHQCGLPKKMALELFKPFIYNRLEMKNLVTTIKGAKKLVERETPDVWDTLSEVVREYP
IMLNRAPTLHRLGIQAFEPLLVEGKAIQLHPLVCQAYNADFDGDQMAVHVPLSIEAQIEA
RVLMMSTNNILSPANGEPIITPNQDIVLGLYYLTRERPLARGEGKIFADRGEVRMAYDAG
EVDLHAAIIVRIDGQRVRTTVGRVVLSEILPEGMVFADLNRVMDKKSLKALVGQCYRQAG
TKATVVLSDRLKDLGYKYATKSGLSICVADMTIPQRKPQIINEAMAEVQLIERQYKDGII
TDAEKYNKAVDIWAKATEDVAAQMMVEIGKDKIVDAEGNETIIDSFNPIYMMADSGARGS
KDQMKQLAGMRGLMAKPSGEIIETPITANFREGLTVLQYFISTHGARKGLADTALKTANS
GYLTRRLVDVSQDAIVTEIDCGTIDGILVEALREGGEVIQHVGERVLGRTALRDVVDPLT
GEVLIKANDEIDEAGVAKLEEAGIERVDIRSVITCESRRGVCAKCYGRDLAHAKPVDVGE
AIGIIAAQSIGEPGTQLTMRTFHIGGAAARSAEQSRIESRFPGELRFINLIVVSHGEGRV
VMNRNGEIALMGEGGRERERHKVPYGARLTFAEGDKVQAGDIIAHWDPYTSPILTDVDGV
VKFGDILEGVTMTERLDPVTGRSTKVTVESKSAEMRPRISIKELGGGRTAKLPSGKGDAR
YLLPVGAIIMVSEGDEVRAGDVLARIPRETTKTKDITGGLPRVAELFEVRRPKECAVISE
IDGAVTFGKQAKGKRKVVVTPDIGDPREYLIPKGKHVTVHEGDYVRAGEPLMDGAINPHD
LLASRDVKELARYLVDEVQEVYRLQGVKINDKHIEVIVRQMLRRVRIIDSGETRYLIGEQ
VEKWRFDEENQRVLENGGRPAVAEPMLLGITKASLSTDSFISAASFQETTKVLTEAAIAG
KVDDLRGLKENVIMGRLIPAGTGLGRYREMAIPHREPVSRFARMQRRPRIDDEPIIEFEY
EDDSEIEEPMEDAGDEAAI |
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| NT seq |
4200 nt +upstreamnt +downstreamnt
ttggaagacctctacagctattttgcaaaacccaaggatccactgtcttttgacgcggtg
aagatttcgctggccagtccggaaaagatcagggcgtggtcctttggcgaggtcaaaaaa
cccgagaccatcaactaccgcaccttcaagcccgagcgcgacggcctgttctgcgccaag
atcttcggccccaccaaggactacgagtgcaactgcggcaagtacaagcgcatgaagcac
cgcggcgtggtctgcgaaaagtgcggcgtagaggtgatccagtccaaggtgcgccgcgag
cgcatgggccacatcgatctggccacgccggtggcccatatctggttcatgaagtcgctg
ccttccaaggtcggcaacctcctggacctgacgctcaaggaactggagaaggttctctat
ttcgagagcttcgtgatcatcgagggcggctccaccggcctggcccggggcacgctggtc
accgaggagcgcctgcgccagttgcgcgacgagtacggcgacgacttccaagccggcatc
ggcgccgaggccctgcaacgcatgctctccgagatcgacctgcagaccctctacgaggag
ctgcgcgccgaaatggacgccaccgccagcgaggccaagcgcaaaaagctgggcaagcgc
ctgaaggtcatcgacgccttcaaggagagcggcaactcgcccgagtggatgatcatggac
atcgtgccggtgctgccgccggacctgcggcctctggtgcccctggacggcggccgtttc
gccaccagcgacttgaatgatctctaccgccgggtgatcaaccgcaacaaccgcctgcgc
cggctcaacgagctctcggcccccgagatcatcatccgcaacgaaaagcgcatgctgcaa
gaggccgtcgacgtcttgttcgacaacggccgccgcggcaagaccatcaccggccccaac
aagcgtccgctcaagtcgctctccgacatgctcaaaggcaagcagggccgtttccgccag
aacctgctgggcaagcgcgtggactactcgggccgttcggtcatcgtcatcggcccggac
ctgcgcctgcaccagtgcggcctgcccaagaaaatggccctggagctgttcaagcccttc
atctacaaccgcctggagatgaagaacctggtcacgacgatcaagggcgccaaaaagctc
gtcgagcgcgagacgcccgacgtctgggacaccctcagcgaggtggtgcgcgaatatccc
atcatgctcaaccgcgcgcccaccctgcaccgcctgggcatccaggccttcgagccgctg
ttggtcgagggcaaggccatccagttgcatccgctggtctgccaggcctacaacgccgac
tttgacggcgaccagatggccgtgcacgtgccgctttccatcgaggcccagatcgaggcc
cgcgtgctgatgatgagcaccaacaacatcctcagcccggccaacggcgagccgatcatc
acccccaaccaggatatcgtcctggggctctactacctcacccgcgagcggcccctggcc
cgcggcgagggcaagatcttcgccgatcgcggcgaggtgcgcatggcctacgacgccggc
gaggtggatctgcacgcggccatcatcgtgcgcatcgacggtcagcgggtcaggaccacc
gtgggccgggtggtgctcagcgagatcctgcccgagggcatggttttcgccgacctcaac
cgggtcatggacaaaaagagcctcaaggccctggtcggtcagtgctatcgccaggccggc
accaaggccacggtggtgctctccgaccggctcaaggacctgggctacaagtacgccacc
aagagcggcctgagcatctgcgtggccgacatgaccatcccccagcgcaagccccagatc
atcaacgaggccatggccgaggtccaactcattgagcgccagtacaaggacggcatcatc
accgacgccgaaaagtacaacaaggccgtcgacatctgggccaaggccaccgaggacgtg
gccgcccagatgatggtggagatcggcaaggacaagatcgtcgacgccgagggcaacgag
acgatcatcgacagcttcaaccccatctacatgatggccgactcgggcgcccgcggctcc
aaggaccagatgaagcagttggccggcatgcgcggcctgatggccaagccctcgggcgag
atcatcgagacgcccatcaccgccaacttccgcgagggcctgacggtcttgcagtacttc
atctcgacccacggcgcgcgcaagggtctggccgacaccgccctcaagacggccaacagc
ggctatttgacccgccgcctggtcgacgtcagccaggacgccatcgtcaccgagatcgac
tgcggcaccatcgacggcattttggtcgaagccctgcgcgagggcggcgaggtgatccag
cacgttggcgagcgcgtgctgggccgcacggccctgcgcgacgtcgtcgacccgctgacg
ggtgaggtgctgatcaaggccaacgacgagatcgacgaggccggcgtggccaagctcgag
gaagccggcatcgagcgggtcgacatccgcagcgtcatcacctgcgaatcgcggcgcggc
gtctgcgccaagtgctacggccgcgatctggcccacgccaagcccgtggacgtgggcgag
gccatcggcatcatcgccgcccagagcatcggcgagccgggcacccagttgaccatgcgc
accttccacatcggcggcgcggcggcccgtagcgccgagcagtcgcgcatcgagagccgt
ttccccggcgagctgcgcttcatcaatctgatcgtggtcagccacggcgagggccgcgtg
gtcatgaaccgcaacggcgagatcgccctgatgggcgagggcggccgcgagcgcgagcgc
cacaaggtgccctacggcgcgcggttgacttttgccgagggcgacaaggtccaggccggc
gacatcatcgcccactgggatccctacacctcgccgattctcaccgacgtcgacggcgtg
gtcaagttcggcgacatcctcgagggcgtgaccatgaccgagcgcttggacccggtcacc
ggccgttcgaccaaggtcaccgtcgagtccaagtcggccgagatgcgcccacgcatctcc
atcaaggaactgggcggcggccgcacggccaagctgccttcgggcaagggcgacgcccgc
tacctgctgccggtgggcgcgatcatcatggtctccgagggcgacgaggtgcgggccggc
gacgttctggcgcgcatcccccgcgagacaaccaagaccaaggacatcaccggcggcctg
ccccgcgtggccgagctgttcgaggtgcgtcggcccaaggagtgcgcggtcatcagcgag
atcgacggcgcggtgaccttcggcaagcaggccaagggcaagcgcaaggtggtggtcacc
cccgacatcggcgacccccgcgagtatctgatccccaagggcaagcacgtcaccgtccac
gagggtgactacgtgcgggctggcgagccgctgatggacggcgcgatcaacccccacgac
ctgctggccagccgcgacgtcaaggaactggcccgctacctggtcgacgaggtgcaggag
gtctaccgcctgcagggcgtcaagatcaacgacaagcacatcgaggtgatcgtgcgccag
atgctcaggcgcgtgcgcatcatcgactcgggcgagacgcgctacctcatcggcgagcag
gtggaaaagtggcgttttgacgaggaaaaccagcgcgtgctggaaaacggcggccgcccg
gccgtggccgagccgatgcttttgggcatcaccaaggccagcttgtccaccgactcgttc
atttcggcggccagcttccaggagaccaccaaggtgctcaccgaggcggccatcgccggc
aaggtcgacgacctgcgtggcctgaaggaaaacgtgatcatgggtcggctgatcccggcc
ggcaccggcctggggcgttaccgcgagatggccatcccccatcgcgagccggtgagccgt
ttcgcccgcatgcagcggcggcccaggatcgacgacgagccgatcatcgagttcgaatac
gaggacgattccgagatcgaggagcccatggaggacgccggcgacgaggccgccatctag |
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