Desulfarculus baarsii: Deba_3071
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Entry
Deba_3071 CDS
T01284
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dbr
Desulfarculus baarsii
Pathway
dbr00260
Glycine, serine and threonine metabolism
dbr00630
Glyoxylate and dicarboxylate metabolism
dbr00670
One carbon pool by folate
dbr00680
Methane metabolism
dbr01100
Metabolic pathways
dbr01110
Biosynthesis of secondary metabolites
dbr01120
Microbial metabolism in diverse environments
dbr01200
Carbon metabolism
dbr01230
Biosynthesis of amino acids
dbr01240
Biosynthesis of cofactors
dbr04981
Folate transport and metabolism
Module
dbr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Deba_3071
09102 Energy metabolism
00680 Methane metabolism
Deba_3071
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Deba_3071
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Deba_3071
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Deba_3071
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Deba_3071
Enzymes [BR:
dbr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Deba_3071
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Gene cluster
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-ProteinID:
ADK86424
UniProt:
E1QLI9
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All DBs
Position
3394273..3395514
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AA seq
413 aa
AA seq
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MDQLRETDSQIAELIQREAARQANVLRMIPSENYASAAVLTATGSILANKYSEGYPRKRY
YQGQEFIDQIEEVAVQRARALFGAEHANVQPYSGSPANMAVYLGLLGAEGRVMGMDLAAG
GHLTHGAKVSFSGSYYDVRQYGLSRENGLIDYEAARRLAREFRPQLIFCGASSYPRIIDF
AIFGEIAREVGAFLAADISHISGLCVTGLHPHPLPHADVITTTTHKMLRGPRGGMILCRA
GLAPAIDKAVFPGLQGGPHNHVTAAIAVALKEASGTAFVEYCRQIVANAKALADELMARG
FKLITGGTDNHLALIDASCRGLTGKILAQAMEKAGIVANANKIPFDPRSANDPSGVRLGT
PALTSRGMKEPEMRRVAALIDRVTDVVGDEAALAKIRAEVEEMCAAFPAPGIA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaccaactccgcgaaaccgactcccagatcgccgaactgatccagcgcgaggccgcc
cgtcaggccaacgtgctgcgcatgatcccctccgaaaactacgcctcggcggcggtgctg
accgccaccggctcgattttggccaacaaatattccgagggctacccgcgcaagcgctac
tatcagggccaggaattcatcgaccagatcgaggaagtggccgtgcaaagggccagggcc
ctgttcggggccgaacacgccaacgtccagccctactcgggcagccccgccaacatggcc
gtctacctgggcctgctgggggccgagggccgcgtgatgggcatggatctggccgccggc
ggccacctgacccacggggccaaggtcagcttctcgggctcctactacgacgtgcgccaa
tacggcctcagccgcgaaaacggcctcatcgactacgaggccgcccgccgcctggcccgc
gagttccggccccagctcatcttctgcggcgcctccagctatccccggattatcgatttc
gccattttcggcgagatagcccgggaagtcggggcgtttctggccgccgacatcagccac
atctcgggcctgtgcgtcaccgggctgcatccgcaccccctgccccacgccgacgtgatc
accaccaccacccacaagatgctgcgcggcccgcgcggcggcatgatcctctgtcgggcc
ggcctggccccggccatcgacaaggccgtcttccccggcctgcagggcggaccccacaat
cacgtcaccgcggccatcgccgtggccctcaaggaggcctcggggacagcgttcgtggaa
tattgccgccagatcgtggccaacgccaaggccctggccgacgaactgatggcccggggc
ttcaagctgatcaccggcggcaccgacaaccatttggcgctgatcgacgcctcctgtcgc
ggcctgaccggcaagatcctggcccaggccatggaaaaggccggcatcgtggccaacgcc
aacaagatccccttcgacccccgctcggccaacgaccccagcggcgtgcgcctgggcacg
ccggccctgaccagccgtggcatgaaggagcccgagatgcggcgggtggccgcgttgatc
gaccgcgtaaccgacgtggtcggcgacgaggcggccctggccaagatccgcgccgaggtc
gaggaaatgtgcgccgcgttccccgcgccgggcatagcgtaa
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