Desulfarculus baarsii: Deba_3225
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Entry
Deba_3225 CDS
T01284
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dbr
Desulfarculus baarsii
Pathway
dbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Deba_3225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dbr03400
]
Deba_3225
Enzymes [BR:
dbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Deba_3225
DNA repair and recombination proteins [BR:
dbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Deba_3225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
Helicase_C
Zn_ribbon_PriA
ResIII
RUBY_RBDX
AAA_16
SDF
Motif
Other DBs
NCBI-ProteinID:
ADK86578
UniProt:
E1QLZ3
LinkDB
All DBs
Position
3566894..3569146
Genome browser
AA seq
750 aa
AA seq
DB search
MSAAQNLGWRVEAAVAAPLWKALSYAAPDDLVPLIGPLCRMIAPLRGRRALAFALARPER
GDVSGLRPIHDVLEAAGGPQMIPPALLNFYQRAAAHYHAPLGQMLAMSLPAGLGALGAAG
VPAASQVAVARLSAKALGQPPELRGQAGELFDYLRQNGPTALPELRRRWPRATALVKGLE
SAGWLAVGQQPVCKDILGRPIGHEPAPERLSAEQEAAVAAIGAAARARRFEPFLLYGVTS
SGKSEVYAQACRQALEQGRAALVLAPEIGLCLRLQGLLAQRLGAETVAVLHSGLSPAARR
DQWARIAAGRARVVVGARSAVFAPLDDPGVICVDEEQDEAYKHEDGPRYHARDLALLRGQ
EQACPVVLGTATPALTTLARARNGGLTTLAMTSRVAGASLPKVEVVDLRSCGRLTAGFLS
PRLHQALRQETAAGRQAVLFINRRGFAPALLCPACGKTVGCPHCSLALCLHLDPPRLICH
ACGHLARPPAQCPSCGADGAQMKPLGLGSEAVVQALARLEPQLRLARLDRDAAGSPAKLG
EILRAMADRRLDVIVGTQMITKGHHFPGIGLVGVLLADQALGMPDFRAAERAYALLTQAA
GRAGRGQDQGRVIIQTYDPAHHAVRAAASHKPEIFYDHELAERRALGYPPFCRITLLRLE
AKDQAVAQQTALALGRELRAAQGDLAADIQTLGPAPAPLAKAKDHFRWQIMLKAPSAAAA
SRLLNLALHRLGPLPAGARLLVDVDPLNMA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcccaaaacctgggctggcgagtggaggcggcggtggccgcgccgctgtgg
aaggccctgagctacgccgcgcccgatgatcttgtcccgctgattgggcccctttgccgc
atgatcgcgccgctgcgcggccggcgcgcgctggccttcgccctggcccggcccgagcgc
ggcgacgtcagcggcctgcggcccatccacgacgtgctggaggccgccggcggcccgcag
atgatcccaccggcgcttttgaatttttatcaacgggcggcggcccactatcacgcgccc
ttgggccagatgctggccatgtcgctgccggcgggcttgggcgcgctgggcgcggccggc
gtgccggcggccagccaggtcgccgtggcgcggctttcggccaaggccctgggtcagccg
ccggagctgcgcggtcaagctggcgaattatttgactatctgcgccaaaatggccccacc
gccctgcccgagctgcgccgtcggtggccccgggccacggccctggtcaagggcctggag
tcggccggttggctggccgtgggccagcagccggtctgcaaggatatcctgggccggccc
atcggccacgagcccgcgccagagcgccttagcgccgagcaagaggccgccgtggcggcc
atcggcgcggcggcgcgggcgcggcgcttcgagccgtttttgctctatggcgtgaccagc
tcgggcaagagcgaggtctacgcccaggcctgtcgccaggccttggagcaggggcgcgcc
gcgctggtgctggccccggagatcggcctgtgcctgcgcctgcaagggctgctggcccag
cgcctgggggccgagacggtggccgtgctgcactcgggcctgagcccggcggcccggcgc
gatcagtgggcgcgcatcgccgccggtcgggcgcgggtggtggtgggcgcgcgctcggcg
gtgttcgcgccgctggacgacccgggcgtgatctgcgtcgacgaggaacaggacgaggcc
tacaaacacgaggacggcccgcgctatcacgcccgcgatctggccctgctgcgcggccag
gaacaggcctgcccggtagtcttgggcacggccaccccggcgctgaccaccctggcccgg
gccagaaacggcggcctgaccaccctggccatgaccagccgcgtggccggggccagcctg
cccaaggtcgaggtggtcgatctgcgctcctgcggccggctgaccgccggctttctcagc
ccgcgcctgcaccaggccctgcgccaggagaccgccgccggccgtcaggcggtgttgttc
atcaaccgtcgcggtttcgccccggccctgctttgcccggcctgcggcaagaccgtgggt
tgcccccattgcagcctggccctgtgcctgcacctcgatccgccccggctgatctgccac
gcctgtggccacctggcccggccgccggcccaatgccccagttgcggggccgacggcgcg
caaatgaaacccctgggcctgggctccgaggccgtggtccaggccctggcccggttggag
ccccaactgcgcctggccaggctcgaccgcgacgccgccggcagcccggccaagctgggc
gagatcctgcgggccatggccgatcgccgcctggacgtgatcgtcggcacccagatgatc
accaaaggccatcacttccccggcatcggcctggtgggcgtgctgctggccgatcaggcc
ctgggcatgcccgacttccgcgccgccgaacgggcctacgccctgctgacccaggccgcc
ggtcgggccggccgcggccaggaccagggtcgggtgatcatccagacctacgacccggcc
caccacgccgtgcgcgccgccgccagccacaagcccgagatcttctacgaccacgagttg
gccgaacgccgcgccctgggctatccgcccttttgccgcatcacgctgttgcgcctggag
gccaaagaccaagccgtcgcccagcaaacggccctggccctgggccgtgaactgcgcgcc
gcccaaggcgacctcgccgccgacatccagaccctgggcccggccccggcccccctggcc
aaggccaaggatcacttccgctggcagatcatgctcaaggcccccagcgccgcggcggcc
tcgcgcctgctcaacctggccctgcaccgcctgggcccgctgccggccggcgcgcggctg
ctggtggacgtggacccgctgaacatggcctga
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