Desulfarculus baarsii: Deba_3260
Help
Entry
Deba_3260 CDS
T01284
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dbr
Desulfarculus baarsii
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dbr03009
]
Deba_3260
Enzymes [BR:
dbr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Deba_3260
Ribosome biogenesis [BR:
dbr03009
]
Prokaryotic type
ribosomal protein modification factors
Deba_3260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ADK86613
UniProt:
E1QM28
LinkDB
All DBs
Position
complement(3610906..3612219)
Genome browser
AA seq
437 aa
AA seq
DB search
MAVFYLLNLGCAKNLVEGEHLAGMLLAEGWLASERPEAADWLIVNTCGFIRPAVDEAIDN
ILELHDERRPGQRLAVVGCLVGRYGRKLARSLPEADLLVAPGRLGDLPALLAAPPAQRLA
IAPPRAIFDAATPRALSTGPGWAYLRLSDGCRHRCHFCTIPAIRGPLRSRPAADILAEAE
AVAQSGVVELNLVAQDLSSYGHDRPDGPDLAALLPQIAAVPGVAWVRPLYLHPDVLETRL
IRAICQTPGVLPYFDLPLQHLADPVLRAMGRRRTGAQLLALIDEIRAMRPEAVLRGTLLV
GHPGEGAAEFTRLMRGVEEIAFDHLGAFAFCPEPGSRSARLPAPSPELAQERLETLMAAQ
RAISAGKLAAQVGQQLSLLAQGPHPDHPYVRWGRTWRQAPEVDGQTIVTDGDPAPGRIHL
CRISASHDYDLEAVAVA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggctgttttttatctgctcaaccttggctgcgccaaaaatctggtggaaggcgagcac
ctggcgggcatgttgctggcggagggctggctggccagcgagcggcccgaggccgccgac
tggctcatcgtcaacacctgcggtttcatccgcccggccgtggacgaggccatcgacaac
atcctggagctgcacgacgagcggcggccgggccagcgcctggccgtggtcggctgcctg
gtggggcgttacggccgcaagctggcccgcagcctgcccgaggccgatctgctggtcgcg
ccgggccgcttgggtgatctgcccgcgctgttggccgcgccgccggcccagcgcctggcc
atcgcgccgccccgggcgatcttcgacgcggccacgccccgggctctcagcaccgggccg
ggctgggcctatctgcgcctgtccgacggctgccggcaccgctgtcatttctgcaccatc
ccggccattcgcgggccgctgcgctcgcggccggccgccgacatcctggccgaggccgag
gccgtggcccagagcggcgtggtcgagctgaacctggtggcccaggatctcagctcctat
ggccacgaccggcccgacggccccgacctggccgcgctcttgccgcaaatcgccgccgtg
cccggcgtggcctgggtccggccattgtatctgcaccccgacgtgttggagacgcgcctg
atccgggccatctgccagacgccgggtgttttgccctatttcgacctgcccttgcagcat
ctggccgacccggtgctccgggccatgggccgtcggcgcactggcgcccaactgctggcg
ctgatagacgaaatccgcgccatgcggcccgaggccgtgctgcgcggcaccttgctggtg
ggccaccccggcgagggcgcggccgagttcacgcggctcatgcggggcgtggaggagata
gctttcgaccacctgggggcctttgccttttgccccgagcccggctcgcgcagcgcccgt
ctgcccgccccaagccccgagttggcccaggagcgcctggaaacgctgatggcggcccag
cgggccatctcggcgggcaagctggccgcgcaggtcggccaacaactgtccctgctggcc
caaggcccccaccccgatcacccctacgtgcgctggggacgcacctggcggcaggccccg
gaggtggacggccagaccatcgtcaccgacggcgatcccgcgccgggccgcatccacctc
tgccgcatcagcgccagccacgactacgacctggaggccgtggccgtggcgtga
DBGET
integrated database retrieval system
