Desulfarculus baarsii: Deba_3269
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Entry
Deba_3269 CDS
T01284
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03086
RNA polymerase primary sigma factor
Organism
dbr
Desulfarculus baarsii
Pathway
dbr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Deba_3269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dbr03021
]
Deba_3269
Transcription machinery [BR:
dbr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Deba_3269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
HTH_28
DUF2805
RNA12
PUMA_CC
LPP
TrmB
Motif
Other DBs
NCBI-ProteinID:
ADK86622
UniProt:
E1QM37
LinkDB
All DBs
Position
3620087..3621178
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AA seq
363 aa
AA seq
DB search
MAASREERFVDPGLDTPVTYFKEVEGRDLLTPERELELGKTIHDGRNEILTKSLVIISRF
QEAEDTCRRITDWLEDSHKSPLSVEDVMAEAKDQVSRCCRRLGEKKVDVEQLVRDINRAR
REVEAAVSEMVEANLRLAVSIAKKYTFRGLSFADLIQEGNIGLMKAVNRYDYRTGYRFST
FASWWIRQTISRAIYDQARTIRIPIHLLELRSKYFRVYYGLLKELGREPTPKEVAEKVGI
TEDKVKEIINLTLDSTSLETPVGEDGDELGDFIENKDAEDPFSMVGETEMHGHLEAALDS
LDGRERRILEMRFGLGDEDEHTLEEVGQVFGLSRERVRQIEKKALQRLRHPQWRTILEDH
VGC
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagccgtgaagaaagattcgtcgatccgggtcttgacacgccggtgacctat
ttcaaggaagtggaaggccgcgacctgctcacccccgaaagggagctggagttgggcaag
accatccacgacgggcgcaacgagatcctgaccaaatcgctggtgatcatcagccgcttc
caagaggccgaggacacctgccggcgcatcaccgattggctggaggactctcacaagtcg
ccgctgtcggtggaggacgtcatggccgaggccaaggaccaggtctcgcgttgctgccgc
cgcctgggcgagaaaaaggtcgatgtcgagcaactggtgcgcgacatcaaccgcgcccgc
cgtgaggtggaggccgccgtcagcgagatggtcgaggccaacctgcgcctggccgtgtcc
atcgccaagaaatacaccttccggggcctgtcgttcgccgacctgatccaggaaggcaac
atcggcctgatgaaggcggtcaaccgttacgactatcgcaccggctaccgcttcagcacc
ttcgcctcgtggtggatccgccagaccatcagccgggccatctacgaccaggcgcggacg
atccgcatccccatccacctgttggagctgcgcagcaaatacttccgcgtctactacggc
ctgctcaaggagctgggccgcgagcccacccccaaggaggtggccgaaaaagtcggcatc
accgaggacaaggtcaaggagatcatcaacctgaccctggactccacctcactggagacc
ccggtgggcgaggacggcgacgaactgggcgacttcatcgagaacaaggacgccgaggat
cccttctcgatggtcggcgagaccgagatgcacggccacctggaggccgccctggattcg
ctggacggccgcgagcgccgcatcctcgagatgcgcttcggtctgggcgacgaggacgag
cacaccctcgaggaagttggccaggtctttggcctctcgcgcgagcgcgtgcgccagatc
gagaaaaaggccctgcaacgcctgcgtcatccccagtggcgcaccatcctcgaagaccac
gtcggctgctga
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