Desulfotomaculum nigrificans: Desca_0008
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Entry
Desca_0008 CDS
T01498
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dca03032
]
Desca_0008
03400 DNA repair and recombination proteins [BR:
dca03400
]
Desca_0008
Enzymes [BR:
dca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Desca_0008
DNA replication proteins [BR:
dca03032
]
Prokaryotic type
DNA Topoisomerases
Desca_0008
DNA repair and recombination proteins [BR:
dca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Desca_0008
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Nnf1
Motif
Other DBs
NCBI-ProteinID:
AEF92913
UniProt:
F6B3U8
LinkDB
All DBs
Position
7600..10062
Genome browser
AA seq
820 aa
AA seq
DB search
MASLTGKVIPLDINNEMKNSYLDYAMSVIVGRALPDVRDGLKPVHRRILYSLHELGLTPD
KPFRKSAGIVGKVMQDFHPHGDMAIYDSMVRLAQDFSSRYPLIEGHGNFGSIDGDPPAAM
RYTEARMAKITLEMLADIDKETVDFAPNYDNRTKEPVILPAKIPNLLINGSSGIAVGMAT
NIPPHNIGEVIDGVIMMIDNPNVTPDELMKVIKGPDFPTGAKIMGRDGIRAAYRTGRGSI
KIRAQATIETKNNGRSAIIVNEIPFQVNKAKLVEKIAELVKDKKIEGISDLRDESDRRGM
RIVIELKKDANPNVILNQLYKFTQMQESFGIIMLALVNNQPKVLNLAQVLFYYLEHQKDV
ITRRTKYELKKAEARAHIVEGLRIALAHLDEVIKIIRESRTTEEAKQGLVTNFNLTEVQA
EAIVEMRLRSLTGLEVEKLEKEYKDLLAKIDYLRSVLADEKKVLGIIKDELTEVKKKFAD
PRRTVISNEAAGDFDIEDLIDEEGMVVTITNQGYIKRISLDTYRSQRRGGKGITAMGTKE
EDFVKHLFVASTHHYLLFFTNQGKAYRLKVHEVPEAGRTAKGTPLVNLLYISSGEYVTTV
IPIKDFTEEAYLFMATKQGVVKKTNLSEYDTSRRDGINAINLDESDELVAVELTHGREEI
ILSTREGMAIRFPEEDVRPMGRTARGVKGITLTGDDSVVNMDVVKDGGDLLVVTANGYGK
RTNLDEYRTQTRGGKGIINIKTSPRNGPVVGALVVKDDDEIMMISAEGIMIRLAAKDVST
FGRNTQGVTLMKVAENDHIVAVAKVAGEEHDEHEEESSEE
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccttactggtaaggtcattcctttggatattaacaacgaaatgaaaaactca
tacctggattatgctatgagtgtaattgtcggtcgtgctttaccggatgtacgggatggc
cttaaacctgttcatagaagaatcctttattctttgcatgaacttgggttgacgccggat
aagccctttagaaaaagtgccggtatcgtgggtaaggtaatgcaggatttccacccccac
ggtgacatggcaatttatgattcaatggttaggttagcccaggatttttccagccgttac
ccgctaattgaaggccacggtaactttggttccattgacggtgaccctccggcggccatg
cgttacactgaggccaggatggctaagattaccctggagatgttggccgacatcgacaaa
gaaacagtggattttgctcctaactatgataaccggaccaaagaacccgttatcttgcct
gccaaaattcctaatttgttaattaacggttcttccggtattgctgtaggtatggccacc
aacattccgccccataacatcggtgaagttattgacggggttatcatgatgattgataat
cccaacgtcacccctgatgaattgatgaaggtgatcaaggggccggattttcccactgga
gctaaaattatgggccgcgatggaattcgtgctgcttatcgcaccggccgcggcagtatc
aagattcgggcgcaggctactattgaaacaaagaataacggtagatcagccattattgtc
aacgaaataccttttcaggtgaacaaagctaaactagttgaaaagattgctgaactggtt
aaggataaaaaaatcgaaggtatatccgacctgcgggatgagtctgaccgccggggtatg
aggattgttatcgaactgaagaaagatgccaatcccaatgttattttaaatcaactttat
aaatttacccaaatgcaagaaagcttcggcatcattatgctggctttggtgaataaccag
ccaaaggtattaaacttagctcaggttttattttactacttggagcaccaaaaggatgtt
attacccggcgtaccaagtatgagctaaagaaagctgaagccagggcgcacattgtggaa
gggttacgtatagccctggcccacctggatgaagttattaaaattatccgtgaatcacgc
actaccgaagaggccaagcagggtttagtgaccaatttcaacttaactgaagtgcaagca
gaggccatagtggaaatgcgcctgcgcagtttgaccgggttggaagttgaaaagttggaa
aaagaatataaagacttgttggctaaaatagattatttacgctcggtactggctgatgag
aaaaaagttttagggattattaaagatgagttaaccgaagttaagaaaaaatttgccgat
cccagacgtactgtcattagtaatgaggctgccggagactttgacattgaagatctgatt
gatgaagaaggcatggtggtaaccattaccaaccagggttacatcaagcgtatctctctg
gatacttaccgcagccaaagaagaggtggcaagggcatcacggccatgggcaccaaagaa
gaagattttgttaaacacctctttgttgcctcaacccaccattacttgctgttctttacc
aaccagggtaaggcgtatcggttaaaggtgcatgaagtaccggaagcaggtcgcaccgct
aaaggtaccccgctggtaaacttactctatatctctagcggcgaatatgtcaccaccgtg
attccaattaaggactttacagaagaagcatatctattcatggctaccaaacaaggggtg
gttaaaaagaccaacctttccgagtatgacacatcccggcgtgacggcattaatgccata
aacctggatgagagtgacgaactggtggcggtggagctcactcacggtagggaagaaatt
atattaagcaccagggaaggtatggccattcgttttccggaagaagatgtgcgccccatg
gggcggacagcccggggcgtgaaaggcataaccctgactggtgacgacagtgtagttaat
atggatgtggtcaaggatggtggcgatctgctggtggtaaccgccaatggttacggtaag
cggacaaacctggatgaataccggacccaaacgaggggcggtaaaggaattattaatatt
aaaaccagcccacgcaatggtccggtagtaggtgcgctggtggttaaagatgatgatgag
attatgatgatcagcgccgaaggaattatgatccggttagccgccaaggatgtgtccacc
tttggccgtaatacccagggagttaccctaatgaaggtagcggaaaatgaccacatcgtg
gcggtggccaaggttgccggggaggaacatgatgagcatgaagaagaaagttcggaggaa
taa
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