Desulfotomaculum nigrificans: Desca_0010
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Entry
Desca_0010 CDS
T01498
Name
(GenBank) Pyridoxal biosynthesis lyase pdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca00750
Vitamin B6 metabolism
dca01100
Metabolic pathways
dca01240
Biosynthesis of cofactors
Module
dca_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
Desca_0010
Enzymes [BR:
dca01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
Desca_0010
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Motif
Pfam:
SOR_SNZ
ThiG
TetR_C_27
Dus
His_biosynth
OMPdecase
NMO
IGPS
FMN_dh
NanE
DUF2795
Motif
Other DBs
NCBI-ProteinID:
AEF92915
UniProt:
F6B3V0
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Position
17608..18492
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AA seq
294 aa
AA seq
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MVEKGTWTVKKGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAGGVAR
MADPNVILRIMDAVTIPVMAKARIGHFVEAQILEALGVDYIDESEVLTPADELFHIDKHQ
FKVPFVCGCRNLGEALRRIGEGAAMIRTKGEPGTGNVVEAVRHMRQVMSEIRMVKNMPKD
ELMTAAKEMGAPYDLVLQVHELGRLPVVNFAAGGIATPADAALMMQLGCDGIFVGSGIFK
SKDPAARAKAIVAATTHYNDPQVLAEISKDLGEAMPGIEISTIAAEQRMQERGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgaaaagggtacatggactgttaagaaaggcctggcagaaatgcttaaaggcggc
gtaattatggatgttaccactccggaacaggctaaaattgctgaagaggctggagcctgt
gctgtaatggctctggagagggttccggctgatataagagctgccggtggggtggccaga
atggctgaccctaacgttattcttcggattatggacgctgtgaccattccggtaatggcc
aaggctcgtattggtcattttgtagaggcacaaatacttgaagccctgggagtagattac
atagatgaaagtgaagtgcttactccggcagatgagcttttccatattgacaagcaccaa
tttaaggtgccctttgtatgcggctgccggaaccttggtgaagccctgcgccgtattggc
gaaggtgcggccatgattcgtaccaagggggaacccggcaccggtaatgtggtagaggca
gtgagacacatgagacaagtgatgagtgagatccgcatggtgaaaaatatgcccaaggac
gagctgatgactgcggcaaaggaaatgggggccccctatgaccttgttttacaagtacat
gaattaggccggctgccggtggttaactttgcggccggtggcattgccacaccggctgat
gctgctttaatgatgcaactaggctgtgacggtatatttgttggttccggtatcttcaag
tctaaggatccggcggccagagccaaagccattgtagctgccaccacccattataatgat
ccgcaagttttagctgagatttccaaagacctgggtgaagctatgcctggtattgagatt
tctaccattgccgcagaacaacggatgcaggaaagaggatggtaa
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