Desulfotomaculum nigrificans: Desca_0028
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Entry
Desca_0028 CDS
T01498
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca03030
DNA replication
dca03430
Mismatch repair
dca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Desca_0028
03430 Mismatch repair
Desca_0028
03440 Homologous recombination
Desca_0028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dca03032
]
Desca_0028
03400 DNA repair and recombination proteins [BR:
dca03400
]
Desca_0028
Enzymes [BR:
dca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Desca_0028
DNA replication proteins [BR:
dca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Desca_0028
DNA repair and recombination proteins [BR:
dca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Desca_0028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
RuvB_N
AAA_30
AAA_5
AAA_19
AAA_7
AAA_14
Mg_chelatase
AAA_18
TIP49
AAA_2
AAA_assoc_2
DnaX_C
Rad17
DUF815
SRP54
RCF1-5-like_lid
DEAD
AAA_16
AAA_11
RNA_helicase
DUF6395
AAA_25
AAA_33
AAA_28
AAA_6
AAA_24
nSTAND3
TsaE
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AEF92933
UniProt:
F6B3W8
LinkDB
All DBs
Position
35733..37361
Genome browser
AA seq
542 aa
AA seq
DB search
MTYKALYRTWRPQNFKDIVGQQHITRTLQNALVNGRVAHAYLFCGPRGTGKTTTAKVLAK
ALNCLRGVDGEPCNECENCRAVNEGSAVDVVEIDAASNRGIDEIRDLREKVKFTPSMGRR
KVYIIDEVHMLTDQAFNALLKTLEEPPAHVVFVLATTEAHKVPVTILSRCQRFDFRRIKP
EEMVQRLKEVAAGSGIEVEEEALWLIAKAAEGGLRDALSILDQAAAFAAKTVSPADIHSI
LGTVQQEVLANMTQYLVQGKTAEALRLISEISDRGKDLRLFTKELTSYLRERLLESMEQR
QPAANINEATLYNLLQILVQAEQEMKWSSQPSLVLELAVVKASRPELAGSLEALSSRVAE
LERKLSGLTVTGGRRPESPVATPVRTPLTKEAPPAAKPQPRIEKAVTDNAPGGQQPINQG
DAAGAERVRQAWPALLKGLKEGGKMPLWTLLSKGSPPLEVNENTLTLYLADEFDFKTADK
PEYRKYFEWLLAKHLGGQWEVRCVHGKKPAARGTTNPKDDPIYQEAVRIFGPELVTLEDD
ST
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
ttgacttataaggcgttgtaccgaacctggcgtccccaaaatttcaaagatattgttggc
caacagcacattacccggaccttgcaaaatgccctggttaatggtcgggtggcccatgcc
tatttattttgcggcccccggggtacagggaaaaccaccaccgccaaagtattggccaaa
gccctgaactgcctgcggggggtggacggggaaccctgtaatgagtgtgaaaattgccgg
gcagttaatgaaggctctgcggtggatgtggtggaaattgatgctgcttccaacaggggt
attgatgaaatccgtgatttacgtgaaaaagtgaaatttaccccttctatgggccggcgg
aaagtatatataatagatgaggttcatatgctgaccgaccaggcctttaatgccctgctg
aagaccctggaggaaccgcctgctcatgtggtgtttgtgctggccaccaccgaggcccat
aaggtgccggtgaccatcctgtcccgttgccaacgttttgatttccggcgcataaagccg
gaagagatggttcagagattaaaggaagtggcggctgggtccggcattgaggtggaagag
gaagctctatggctaattgccaaggctgccgagggaggcctgcgggatgccttgagcata
ctggatcaggccgcagcttttgccgccaaaactgtctcccccgctgatatacatagtatt
ctgggaaccgtacagcaagaggtactggctaatatgacccaatacctggttcaaggcaaa
acagccgaggccctgcgattaatatctgagatcagcgaccggggcaaggatctgcggctg
tttactaaagagttaacttcttacctgcgggaacgattgctggaaagtatggaacagagg
cagcctgctgccaacataaatgaggctacactttataatctgctgcagatactggtgcag
gcggaacaggaaatgaaatggagttctcagcccagcctggtattggaattggctgtggtt
aaagcctcccggccggagttagccggttctctggaggcattgtccagcagggtggcggaa
ttagagcggaaattatcaggtctaactgttaccggtggccgccgtccggagtcaccggtg
gcaacaccggtaaggacgcctttaacaaaggaggccccaccggccgccaaaccccagccc
aggattgaaaaagcagtaaccgacaatgcccccggggggcaacaaccgataaatcaagga
gatgctgccggagcagaaagggttcgccaggcttggcccgcacttttaaagggactcaag
gagggcggcaagatgcctctttggactttactaagtaaaggctcgccgccactggaggtt
aatgaaaatactttaactttatacttggctgatgagtttgactttaagacagcggacaaa
cctgaatacaggaaatactttgagtggttattggcaaaacatctggggggccaatgggag
gttcgctgtgtgcacggaaaaaagcctgccgcccggggaaccaccaatcccaaggatgat
ccaatttatcaagaggcggttcgaattttcggtccggagttggtaaccctggaggatgat
tccacttag
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