Desulfotomaculum nigrificans: Desca_0041
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Entry
Desca_0041 CDS
T01498
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca03030
DNA replication
dca03430
Mismatch repair
dca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Desca_0041
03430 Mismatch repair
Desca_0041
03440 Homologous recombination
Desca_0041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dca03032
]
Desca_0041
03400 DNA repair and recombination proteins [BR:
dca03400
]
Desca_0041
Enzymes [BR:
dca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Desca_0041
DNA replication proteins [BR:
dca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Desca_0041
DNA repair and recombination proteins [BR:
dca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Desca_0041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
AAA_16
DUF6587
RuvB_N
Mg_chelatase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEF92946
UniProt:
F6B3Y1
LinkDB
All DBs
Position
45866..46876
Genome browser
AA seq
336 aa
AA seq
DB search
MVLKLKDVIGHREIVQILKNAVQRDRVAHAYLFLGPQGVGKQTVARAFARVLLCDRPIDG
DACGRCRSCQQMAHDNHPDLHFMEPAGASIKIEQIRELLRKVQFKPYQAERQVFMLEMAE
AMTTEAANCFLKTLEEPGSQSVFLLISHRPYALLPTILSRCQQLQFRPLSNGEVAAGLMH
VCGLEPEKARQLAPMAGGSLGRAVQLAQGSDQWPARTKILDLVGRIPEMDKVQALGTAEE
LSADRAAAGEYLDLLLLWFRDMLVYKYTSDQSMLINQDVVDKLVQQVELYTPDGLVAIIE
EIKQARDRVLANANTRLALEAMMLKIYSYGGLYNAS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
ttggtgcttaaacttaaagatgtaattggtcaccgggaaatagtccaaattttaaaaaat
gctgtgcagcgggaccgggtggcccatgcctatctttttttgggcccccagggggtaggt
aaacaaacagtagcccgggcctttgcgagggtgctgctgtgtgaccgcccgatagacggg
gacgcctgtggccgctgccgttcttgccagcagatggctcatgataatcatccggatttg
cattttatggaacctgccggggcatcaattaaaattgaacaaatacgtgaattactaaga
aaagtacagtttaagccctatcaggccgagcggcaggtttttatgctggagatggctgaa
gccatgaccaccgaagcagctaattgctttttaaaaacattggaagaacccggcagtcaa
tcagtatttttattaatcagtcaccggccctatgccctgttacccaccattttgtcccgt
tgccagcaattgcagtttcgccccttgagtaacggggaagtggcggcgggtttaatgcat
gtttgtggactggaaccggaaaaggcccggcaactggcaccaatggccgggggtagttta
ggccgggcggtgcagttagcccagggctcggaccaatggccagcccggactaaaatcctg
gatttggtgggccggataccagaaatggacaaagtgcaagccctgggcacagccgaggaa
ctgtccgccgaccgggccgcagcaggggaatatctggatttgcttctgttgtggtttcgt
gatatgttggtttataagtatacttctgaccaaagtatgttgataaatcaagatgtagtg
gacaagttagtacagcaagtggaattgtataccccggatgggttggtggccataattgaa
gagataaaacaggccagggacagggttttggccaatgccaataccaggctggctttggaa
gctatgatgttgaaaatatactcctatggaggattatataatgccagttaa
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