Desulfotomaculum nigrificans: Desca_0102
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Entry
Desca_0102 CDS
T01498
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dca03032
]
Desca_0102
03036 Chromosome and associated proteins [BR:
dca03036
]
Desca_0102
03400 DNA repair and recombination proteins [BR:
dca03400
]
Desca_0102
DNA replication proteins [BR:
dca03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Desca_0102
Chromosome and associated proteins [BR:
dca03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Desca_0102
DNA repair and recombination proteins [BR:
dca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Desca_0102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_euk_1
HU-DNA_bdg
Peptidase_C80
PqqD
Motif
Other DBs
NCBI-ProteinID:
AEF93007
UniProt:
F6B4I4
LinkDB
All DBs
Position
103593..103880
Genome browser
AA seq
95 aa
AA seq
DB search
MNKAELISAVAEKTELTKKDAEKAVSAVLDSIQEAMAKGDKIQLVGFGTFESKARKAREG
RNPQTGETIQIPATRVPVFKPGKALKDAVANLPVE
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaggccgaattaatctctgccgtagcagaaaaaaccgaattaaccaagaaagat
gctgaaaaagctgtatctgccgttttggatagcattcaggaggctatggccaaaggtgac
aaaatccaactggtaggtttcggtacctttgaatccaaagcacgtaaagccagggaaggt
cgtaacccgcaaaccggggaaaccattcagatacctgccaccagggtacctgtatttaaa
ccgggtaaagccctgaaagatgctgtggctaatcttcctgtagaatag
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