Desulfotomaculum nigrificans: Desca_0124
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Entry
Desca_0124 CDS
T01498
Name
(GenBank) transcriptional regulator, DeoR family
KO
K03436
DeoR family transcriptional regulator, fructose operon transcriptional repressor
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dca03000
]
Desca_0124
Transcription factors [BR:
dca03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Desca_0124
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_PafC
HTH_5
MarR
TrmB
HTH_IclR
MarR_2
HTH_24
HTH_20
Dimerisation2
HTH_23
HTH_29
HTH_9
Replic_Relax
Sigma70_r4
Rrf2
HTH_AsnC-type
FeoC
HTH_Tnp_ISL3
HTH_Mga
HTH_36
HTH_Crp_2
Fe_dep_repress
HrcA_DNA-bdg
Mga
LexA_DNA_bind
HTH_28
HTH_32
Put_DNA-bind_N
bact_SelB_WH_2nd
Motif
Other DBs
NCBI-ProteinID:
AEF93028
UniProt:
F6B4K5
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All DBs
Position
128350..129108
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AA seq
252 aa
AA seq
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MSGERQEKIRLLLQEHGHLTVSELAQRFEVSEMTIRRDLKALAALGLVQREHGRALYPQT
ATNTRFFSRLGEAEREKTAIGRLAAGLVAEGETIILDAGTTTLAVAQSINKPCVVITNSL
PIASVLANREGETTVLVTGGEVRGTTHALVGPMARAGFAGFNADKLFLAATGVSIERGLS
TNNMLESEVKQAMLTAAREVILVAHSAKFNHVYYHTFARWDKVHTVITDAGLPEATRREL
ENLGVKVLVAQL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgagcgccaagagaagattcgcttattactccaggaacacgggcatctgacc
gtctcggaattggcccagcgttttgaagtatctgaaatgaccattcgacgggacttaaag
gcccttgccgctttaggcctggtgcagcgtgaacacgggcgggcgctctatcctcagact
gccactaatactcgttttttctcccggttgggagaggccgagcgggaaaaaaccgccatt
ggccgtttggctgcgggtctggttgcagagggagagaccattatcctggacgcggggaca
accaccctggctgttgcgcaatccatcaacaaaccctgtgttgtcattaccaactcgctg
cccatcgcctcggttctggccaaccgcgagggggaaaccaccgtgctggttaccggggga
gaagtgcggggaaccacccacgcactggtggggccgatggcccgggccggttttgctggc
ttcaatgctgacaagttgtttcttgctgctaccggtgtcagcattgaacgcgggttgtct
accaacaatatgttggaatcagaggttaaacaggccatgctgactgccgccagggaagtc
attctggtggcccatagtgcgaaatttaatcatgtatactatcacacctttgcccggtgg
gataaggtacataccgtgattaccgatgccgggttgccggaggcaacccgcagggaactt
gaaaatttaggggtcaaagtattggtagctcaactataa
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