Desulfotomaculum nigrificans: Desca_0176
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Entry
Desca_0176 CDS
T01498
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dca03400
]
Desca_0176
DNA repair and recombination proteins [BR:
dca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Desca_0176
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
AAA_16
Lon_C
nSTAND_NTPase5
DUF7129
NACHT
AAA_24
AAA_22
nSTAND3
SLFN-g3_helicase
Rad51
DAP3
ABC_tran
DZR
Motif
Other DBs
NCBI-ProteinID:
AEF93080
UniProt:
F6B561
LinkDB
All DBs
Position
196491..197843
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AA seq
450 aa
AA seq
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MRKKTIYTCQQCGHKTARWMGRCPGCGEWNCLVEEKPAPRGQISPGISGSGPVPVTDVLT
IDEERYTTGLGELDRVLGGGVVPGSLVLVGGDPGIGKSTLLLQAAFSIAAQVGVVLYVSG
EESARQIKMRARRLQALHPNLLLMAETDMSVVERCIQEINPVAVILDSIQTVFHPDVTSS
PGSVAQVRECTGILMKVAKSTSIPIFVVGHVTKEGTLAGPRVLEHMVDTVLYFEGERHQS
FRILRAVKNRFGSSHELGIFEMGNSGLAEVSNPSALFMAQRPAAVAGSAIVPSLEGTRPL
LVEIQALVCPTGFGMPRRMTSGVDYNRVALIMAVLERRVGLKLANHDAYVSAVGGVKLDE
PAVDLAIALAVASSFKEKPLASGLVVLGEVGLTGEIRAVSGMDKRLQEAAKLGFTRCIGP
QREQQSTLLGIIDYTGIQSLAEALEAAMDR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcaaaaagacaatctatacctgccaacaatgtgggcataaaaccgcccgctggatg
ggacggtgtcccggttgtggggaatggaactgtctggttgaagaaaaacccgccccccgg
ggccaaataagtccggggatatcgggatccggtccggtgccggtaacggatgttttgacc
atagatgaggaaaggtataccaccggcctgggtgaattggacagggtgctgggtggcgga
gtggtgccgggatcgctggtgttggttgggggtgacccgggtatcggcaaatccaccctg
ttgctgcaggccgctttctccattgcggcgcaggtgggtgtggtgctctatgtgtcggga
gaagagtcagcccggcaaattaaaatgagagcccggcgtttacaggcgttgcaccccaat
ttattattgatggcggaaaccgacatgtccgtggtggagcggtgtattcaagagattaac
ccggttgccgtgatactggattccattcagaccgtatttcatcccgatgtgacatcttct
cccggcagtgtagcccaggtgcgggaatgtaccggcatcctgatgaaggtggccaaaagc
acctccatccctatttttgtggttggtcacgtcaccaaagaggggacattggcgggtccc
cgggttttagaacatatggtagatacggtgctgtactttgaaggagaacggcaccaatca
tttcgtattttacgggcggttaagaaccgttttggctccagtcatgagttgggtattttt
gagatgggtaactccggattggcggaggtaagtaacccttcagcgttatttatggcccaa
cgaccggcagcagttgctggctcggccattgtccccagtctggaaggtacccgtccgctg
ctggtggaaattcaggccctggtctgtcctaccggctttggcatgcccagacgcatgact
tccggggtggattataaccgggtagccctgattatggccgttttggaacgccgggtgggc
ttaaagctggccaatcacgatgcttatgtcagtgccgtaggcggagtaaaattagatgaa
ccggcggtggatttggccattgccctggccgttgcttccagctttaaagaaaaacctctg
gccagcgggttggtggttttgggggaagtgggcttaaccggcgagataagagcggtatca
ggtatggataaacggctgcaagaggcagctaagttaggttttacccgttgtattggcccc
caaagggaacagcagagtacattattgggtataatagattatacaggtattcaatccctg
gcagaggcgttggaggccgccatggaccggtaa
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