Desulfotomaculum nigrificans: Desca_0295
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Entry
Desca_0295 CDS
T01498
Name
(GenBank) Integrase catalytic region
Organism
dca
Desulfotomaculum nigrificans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
Mu-transpos_C_2
GerE
TnsD
rve_3
Retrotran_gag_4
Penicillinase_R
HTH_32
Motif
Other DBs
NCBI-ProteinID:
AEF93199
UniProt:
F6B6C8
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Position
313661..315184
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AA seq
507 aa
AA seq
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MYSELYQLKEMGLKKSQVARQLNLDIKTVRKFWDMSAEDFARYLQQVNTRSRKLDKHHDV
ILGWLRQFPDISSAQVMDWLKEHYQLDCRERTVRRYVSNLRKKHNIQKKEAARQYQAMAD
PPMGYQMQIDFGETTVRKSTGGFMKIYGMGTVLSHSRYKYAEWTDTPLTVATFIRMLGRC
FDYIGGIPEELVFDQDKLVAVSENYGDIIYTYEFEKFKQAMGFKVHLCRKGDPESKGRVE
AVVKYMKHNFANNRLFIDLKTWNQSCEDWLGRTANSKIHGTTKKVPAEVFLLEKQHLKPI
PLTNSKPKDIVTRVVRKDNTILYKSNRYTVPVGTYKPGLELELRIQDDCIVLYHLFSEEI
VAKHKISPGKGVLVQNNNHLRDNSQKINALYEKTLGALGNTNNAAKFLKAVRQEKSRYVR
DQFGLMEQVAKNYPQQIVEQAIAYCLEQSLYSAVDCRSAAEYFSSCQEAPVDISMLDNPE
SWPKYLQVKAQRRSITVYSDLLGGENL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcgagttataccaacttaaggagatgggtctaaagaagtcccaggtagcgagg
caacttaacctggacattaagacagttcgcaagttctgggatatgagtgctgaggatttt
gccagataccttcaacaagtcaatactaggtctagaaagcttgataagcaccatgatgtc
atccttggatggttacggcagtttcccgatattagtagtgcccaggtaatggactggctc
aaagagcactaccagctagattgtagggaacgcaccgtgagacggtatgtctcaaattta
cgtaagaaacacaatatccagaagaaagaagcagcccgacaataccaagcaatggctgat
ccaccgatgggctatcagatgcagattgattttggggaaacaacagtaaggaaatccaca
ggtggattcatgaaaatttatggcatgggcaccgtgctatcacattcacgctataagtac
gccgaatggacagatacccctttaactgtggctacctttatccgaatgcttggtcgatgt
tttgattacattggcggtattccagaagaactggtatttgaccaagataagctagtggct
gtcagtgaaaattatggtgatattatctacacctatgaatttgagaaatttaagcaagca
atgggttttaaagtgcatctttgtaggaaaggtgatccagaaagtaagggcagagtcgag
gccgtggttaagtacatgaagcataactttgctaacaatcgcctattcattgacctgaag
acctggaaccaaagctgtgaagattggcttggacggactgcaaatagcaaaatccatggg
acaacaaaaaaggtaccagctgaggtgtttctcctggaaaagcaacacctaaagccaata
cccctaacgaatagtaaacctaaggacattgtaacaagggtggtaagaaaagacaacacc
atcctatacaagagcaaccgttacacagtgccagtggggacgtataaaccaggtctagaa
ttagaattaagaattcaagatgactgtattgttctctaccacctctttagcgaagaaatc
gtggccaaacataaaattagccctgggaaaggagttctggtacaaaacaacaaccatctg
cgggataacagccaaaagattaacgccctttatgaaaagacccttggtgccctaggcaat
accaacaatgccgctaagtttctcaaagctgtccgccaagagaagagcagatatgttcgt
gatcaatttggcttgatggaacaggtggctaagaattatccacaacaaattgtagagcaa
gccatagcctattgtcttgaacagagcctttacagtgctgtggattgccgtagtgcagcg
gaatacttttcaagttgccaagaagcccctgtagatatttctatgctagataatccagag
tcttggcccaaataccttcaggtgaaggcacagcgacggagcatcacggtgtactctgac
ctcctgggaggtgagaacctgtga
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