KEGG   Desulfotomaculum nigrificans: Desca_0536
Entry
Desca_0536        CDS       T01498                                 
Name
(GenBank) CRISPR-associated protein, Csd1 family
  KO
K19117  CRISPR-associated protein Csd1
Organism
dca  Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:dca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dca02048]
    Desca_0536
Prokaryotic defense system [BR:dca02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    Desca_0536
SSDB
Motif
Pfam: Cas_Csd1 HTH_cyano
Other DBs
NCBI-ProteinID: AEF93428
UniProt: F6B7Q6
LinkDB
Position
579712..581490
AA seq 592 aa
MIINALYECYERLLTDPGSGVSPPGYSKAKVSYALNISHKGELLNVIDLRVMKGKKLSSR
DIDVPEQVKRASGIAPNFLCDNCVYVLGIGYIGKEKDSKWIMKRFEAFRRRQHEILDGVD
DIGAQALLRFLDDWDPTKAVEHPLLREHLDGLADGGNIVFMLKGEHGYLHERPALRAAWE
YHRSNSDSDRIGQCLVTGKRAPLARLHPSIKGVTGAQPSGASLVSFNLNAFTSYGKEQSY
NSPVAVEAAFAYTTALNYLLASGRHRLRIGDTTTVFWAERIGSGIEEDFFAELFDPAWDT
GKRDNKDDKPKRDPKTTGLVRDVLTRIREHKPVRDVMKEVDPDARFYILGLAPNASRLSV
RFWHVDTFGSLTEKIGRHYSDMAIEKNWDTDPDFIPLWQILKETAPLGDMERVSPLLAGA
LTRAILLGLPYPQSLFTAMLSRVRADQTVNYVRAAVVKACLIRNYKHLDESKKEVVESMS
LKEDNLNLPYRLGRLFALLEKVQQDANPGINATIRDRYFGAASATPRAVFPLLLRLSQHH
ISKAEYGFVTDKKIEEIMIGIDNFPSHLNLEEQGLFVLGYYHQRNALYKKSN
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgattatcaatgcactgtacgaatgctacgaacggctccttacggatccaggttcgggg
gtttccccgccgggatacagtaaagccaaggtcagttatgctttaaacatttcccataag
ggagagctgctcaatgttattgacctgcgggttatgaaaggaaagaagttaagcagtcgt
gacatagacgtgccggagcaggttaagcgcgcatctggaattgccccgaatttcctttgc
gataactgtgtgtatgttctgggaatcggctatattggcaaggaaaaagattcaaaatgg
attatgaaacgttttgaagcttttcgaagacgtcaacacgagattttagatggcgtggac
gatatcggagctcaagcgttgttacgatttttggatgattgggacccaaccaaagctgtg
gaacatccattactgcgtgaacacttggatggcctggcagatggcggcaacattgttttt
atgctaaagggagaacatggatacctgcatgaacgacctgccctgcgtgcagcctgggaa
taccaccgcagcaatagcgattctgatcggataggacaatgcctggttaccggaaaacga
gctccgctggcgcggctccatccaagcataaaaggggtaacgggtgctcagccttccggc
gcatcgctggtttcctttaacttgaacgcatttacatcttatgggaaagagcagagttac
aattctccggttgccgtagaagccgcttttgcctatacaacggccctcaactatcttctg
gcaagcgggcggcacagactgcgcatcggtgacacaacaactgttttttgggcggagcga
atcggttcaggaattgaggaggatttttttgcagaactttttgaccccgcgtgggatacc
ggtaagcgagacaataaagatgacaaaccaaaacgcgacccgaagaccaccggtcttgta
cgagatgttctgacaaggatcagggagcataagcctgtacgggatgtaatgaaggaagtt
gaccctgacgcccgcttctatattctaggccttgcgccgaatgccagccgcctgtcagta
cgattctggcatgttgacacctttgggtcgctgacagaaaaaattggccgccattattca
gacatggctattgagaagaattgggacacagaccccgacttcatcccgctgtggcagata
ctgaaggaaactgcgccgctgggtgacatggagcgtgtttcaccgctgcttgccggtgct
ttaacaagggcgattttgcttgggttaccgtatccgcagagtctgttcactgccatgttg
tcccgtgtgcgtgcagaccagacagtcaattatgttagggcggcggtggttaaggcctgc
cttatccggaattacaaacatttggacgaatcaaagaaagaggtggtggaatccatgagt
ctgaaagaagacaatctcaacctcccctatcgtctcggacgtttatttgccctgttggag
aaggtgcagcaggatgccaatcctggtattaatgccaccatacgagaccgatattttgga
gcggcatcggctaccccccgcgccgttttcccgttgcttttaagattgtcgcagcatcat
atttccaaagcagaatatggatttgtgacggacaagaagatcgaagaaattatgataggc
attgacaacttcccttcgcatcttaatttagaggagcaggggctctttgttttaggttat
taccatcagcgcaatgcgctatataaaaaatccaattag

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