Desulfotomaculum nigrificans: Desca_0710
Help
Entry
Desca_0710 CDS
T01498
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca00550
Peptidoglycan biosynthesis
dca01100
Metabolic pathways
dca01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Desca_0710
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Desca_0710
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dca01011
]
Desca_0710
Enzymes [BR:
dca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Desca_0710
Peptidoglycan biosynthesis and degradation proteins [BR:
dca01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Desca_0710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AEF93595
UniProt:
F6B8M3
LinkDB
All DBs
Position
778539..780515
Genome browser
AA seq
658 aa
AA seq
DB search
MDRKNINKKTKVLLFIVSSIFLVLVSRLAYMQLIETERFETLSKQNHMRLNPIIAPRGEI
YDNHGVKIVGNQPVYTVSLVYLGLKNTDQVVNRVANILGMDPKVIMDKLEKQQLRLYQPV
RLATNVPLETVTAIEEQRLDLPGVVIDVEPIRSYPFGSMLSHVLGYVQEIKQDQLKANQD
KGYNLGDMYGQDGLENSFESVLRGEDGARQVEVDAQGRPVRDLGVKEPVPGNNLHLTIDT
KLQQVAEQSLERQVLAMRRQGYEAKGGATVMIDVRTGAIRAMASYPTYNPSIWINGLSQA
QWENLQKSGALPNRNLQLYPPASTFKMVLAAAGLDTGKITANWSISDPGHYVFGNKTFND
WDPRGHGRVDVRKAIAQSCDTFFWTLGHRLLGVETIGKYAHMFGLGEKTGIEIPGEPAGV
VPTPEYKYKRNKAFLDAVYGPKFKAIEEKYKPLLASATDPAERERLEKAKQKEIQAVEKD
RNQYTWDLNWQVYDTLNMSIGQGYNAYTPLQVANYIATIANGGTRWKPYLVEKITRPDGK
VIQQFKPQKLGQVSIKPQDMKVIQEGMHMVTTVGTGAGVFRNFPVQVAGKSGTGEVAGHD
NHAWFVAYGPFDNPEVAVATVIDYGGHGGSAAGPVCRDLLAAYFGVKSVPQQTGYSPE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttggacaggaaaaatattaacaaaaagacaaaagtgctcctctttattgtgtcttccatc
tttttggttttggtaagcaggctagcctacatgcaattgatagaaaccgagcgttttgaa
actttgtccaaacaaaatcacatgcggttaaatcccattatcgcccctcggggagaaatt
tacgataatcatggcgtgaagattgtcggcaatcaaccggtgtatacagtttcactggtg
tacctgggccttaaaaataccgaccaggtggttaaccgggtggccaatatcctgggtatg
gaccccaaggtgattatggacaaattagaaaaacagcaattgcgcctgtaccaaccggta
cggttagccaccaatgtgcctctggagactgtcaccgccatcgaggaacagcggttggat
ttgccaggtgtggtcattgacgtggaacccatccgctcatatcccttcggctccatgctg
tcccatgtgctgggctatgttcaggaaatcaaacaggaccagttaaaagccaaccaggat
aagggttataacctgggagatatgtacggccaggatgggttggaaaactcctttgaatct
gttttgaggggtgaagacggggcccggcaggtggaggtggatgcccagggccggccggtg
cgggatctcggcgtaaaggaaccggtgccggggaacaacctgcacttaaccattgatacc
aagctgcagcaggtggctgaacaatccctggaacgccaagtactggccatgcgtaggcag
ggatatgaggccaagggcggggccacggtgatgattgatgtacgcaccggtgccatccgg
gccatggccagctaccccacctataatccgtccatttggattaacgggttaagccaggct
caatgggaaaatttacaaaaaagcggtgctttacccaatcggaatctgcaactctacccg
ccggcctctacctttaaaatggtgctggcggcggcaggtctggacaccggtaaaattacc
gccaactggagtatctctgacccgggacattatgtattcggtaacaaaaccttcaatgac
tgggatcccaggggacacggccgggtcgatgtgcgtaaagccattgcccaatcctgtgac
acctttttttggaccttgggccaccgtcttttgggggtagaaaccatcggtaagtatgcc
catatgtttgggttgggagaaaaaaccggcatcgaaattcccggtgaaccggccggtgtg
gtacccacacctgagtataaatacaagcgtaacaaggcctttttagatgctgtctacggt
cccaaatttaaggccattgaggaaaaatacaagcccttactggccagcgccactgacccg
gccgagcgggagcggttggaaaaggctaagcaaaaggagatccaggccgtggagaaggac
cgtaaccagtatacctgggacctgaactggcaggtttacgataccttgaacatgtccatc
gggcagggttataacgcctatacacctttacaggtggctaactatatcgccaccattgcc
aacgggggcaccaggtggaaaccatacctggtggaaaagatcacccgcccggacggtaaa
gtaatccagcagtttaagccgcaaaaactgggccaggttagtattaagccgcaggatatg
aaggttattcaagaaggtatgcacatggtcaccactgtgggtaccggggctggtgtattc
agaaatttccctgttcaggtggccggtaaatccggtaccggcgaggttgccggtcacgac
aaccatgcctggtttgtggcctatggtccctttgacaatccggaagtggccgtagccacg
gttattgactatggcggtcatggtggttcggcggccggtcccgtgtgccgggatttgctg
gcagcatacttcggcgttaagtctgtgccgcagcaaaccggctactctccggaatag
DBGET
integrated database retrieval system
