KEGG   Desulfotomaculum nigrificans: Desca_0730
Entry
Desca_0730        CDS       T01498                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dca  Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:dca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dca02048]
    Desca_0730
Enzymes [BR:dca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Desca_0730
Prokaryotic defense system [BR:dca02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Desca_0730
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Cas3_HD Helicase_C ResIII HD
Other DBs
NCBI-ProteinID: AEF93615
UniProt: F6B8W4
LinkDB
Position
798951..801296
AA seq 781 aa
MYLDDIKQALADVWAKSTDSSEKSGLSLFQHTENVIKQMGQFILLYHTELNQVAEMNMTR
VLLYAALMHDFGKIHPGFQRMLRKGTRFGLRHELLSLAFLEFLKIPPEEKPYLASAIALH
HKNWVFITNGDIIYYDRCFSVEEVNSVFRLVEGLKQHEINGLLLLLKNAGTYLLTVTGFC
IEPYKFIENSITPSGIYRNLTLIDHFIGTFVKQGRRAGRQINRQVCHYATIARGLILSAD
HLASAKPMELTPGFTSAEQVLTALNLTDDSLHPHQKQLKEAATSKILIAPTGSGKTEAAL
LWAGSVREAKQTKGRLYFLLPYRASINAMANRLRRGFGEQSTAVIHGKTLIESYQQLMEN
GYTPDEARKLASYQESLARLNTTPIRICTPYQLVKTFFAPNGYEAMLCSALGAQLVFDEI
HAYDTELTAMTVAAAKFMKHVLGAECLFMSATLPNHLKNILQEQFMLDEPVKPSGEWLAS
RVRHRLNLIDNHITSVNSIERIKQSAEQGSVLVVVNTVPRAVKVVEELNKVGLRDITLLH
SKFCPRDRIDKERKLQPIEGKILVATQVVEVSLDIDYDTLFTELAPLESLLQRFGRVNRN
RPLESKGVSTVNVFTEFANDNETSYRPYNKAHLCQVKKVLQDYLRENPGGVINETKIQDM
LDASYPEVLKEDLAIKIKDRLERFDKSFVQELLPLGINEMGTIKNLREEWDNLFDGVEVL
PAKYLDEARNMPNPLDVAQLLVPISRAQLQRLQRERKAWRDEEINQIITNCDYSYQYGLI
I
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgtatttagacgacataaaacaagctttagcggatgtttgggccaaatcgacggatagc
tccgaaaaatcggggctatccctgtttcaacataccgaaaacgttattaaacagatgggg
cagtttattttactctatcatacagagctaaatcaggttgctgaaatgaacatgacccgg
gtgttattatatgcagccttaatgcacgattttggcaaaatacaccccggatttcaacgg
atgcttcgtaagggcaccaggttcgggcttcgtcatgaactattgagtctcgccttcttg
gagtttctgaagattccaccggaagagaaaccttatctggcttctgcaattgctcttcat
cataaaaattgggttttcataactaacggagatattatttattatgatcgctgtttcagt
gttgaagaagttaattctgttttcagattggtggaaggtttaaagcaacacgaaattaat
ggattgttattactattgaaaaatgccggaacatatttgttaactgttaccggtttttgt
atagaaccatataagtttatagaaaattccataacaccttcgggtatttatcgaaatctg
actcttattgatcattttattggtaccttcgtaaagcaagggaggagagcaggtagacaa
attaaccggcaggtatgccattatgccaccattgccagggggctaatcctgtcggcagat
catttggccagtgccaaaccaatggaactaacaccggggtttacctctgctgaacaagta
cttacagctttaaatctgactgatgactcccttcatccccaccagaaacagctaaaagag
gcagctaccagtaaaattttaatagcacccacaggttcagggaaaacagaagctgcactg
ctatgggccggttctgtcagagaggctaaacaaactaaaggcaggctatattttttacta
ccttaccgggctagtattaatgcaatggcaaataggctgcgaaggggtttcggagagcaa
tcaacggctgtgatacacggtaagactctaattgaaagttatcagcagttgatggaaaat
ggctatactccggatgaagcccggaaattagccagctaccaagagtccctggccagatta
aatacaacccccattagaatatgcaccccttatcaacttgtgaaaacttttttcgcaccc
aatggttatgaggccatgctttgctccgccttaggagcccagctggtatttgatgaaatt
catgcttatgacactgaacttacagctatgacagtggctgctgccaaatttatgaagcac
gtattgggtgccgagtgcttatttatgagcgccacattacccaaccatttaaaaaacata
ttacaagaacaattcatgcttgatgaacccgttaaaccgtctggggaatggttggcatcc
agggtaaggcatagactaaacctaattgacaaccatatcacctctgtaaattccattgaa
agaattaaacagtccgctgaacaaggttctgtgttggtggtggttaatactgttccccgg
gcagtgaaggttgtggaagagctaaataaagtggggttaagggatattacccttttacac
agtaaattctgccctagagatcggatagataaagagcggaaattacaaccgattgaaggt
aagatacttgtggccacccaggtagttgaggtgtcacttgatattgattatgataccctc
tttactgaacttgcccccttagagtccttactccaaaggtttggccgggttaatagaaat
agacccctagaaagcaagggggttagcaccgtaaatgtttttacggaatttgccaatgac
aatgaaacatcatacaggccctataataaggcccacttatgccaagtgaaaaaggtgctg
caagattatttaagagaaaaccccggcggggttatcaatgaaactaagattcaagatatg
ttagacgccagttaccctgaagtattaaaagaagatttggctataaaaattaaagataga
ttagagcgttttgataaaagttttgttcaggaactactgcccttaggcataaacgaaatg
ggaacaattaaaaacctgcgggaagaatgggataacctttttgacggggtggaagtgtta
ccagcaaaatatctggatgaagcccggaatatgccaaacccccttgacgtggcccaatta
ctggttccaatatctcgtgcacagttacaaaggttacaaagggaaagaaaggcatggcgg
gatgaagagattaatcagattattaccaactgtgattacagctatcagtatgggctaatt
atttaa

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