Desulfotomaculum nigrificans: Desca_0819
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Entry
Desca_0819 CDS
T01498
Name
(GenBank) Formate dehydrogenase
KO
K00125
formate dehydrogenase (coenzyme F420) beta subunit [EC:
1.17.98.3
1.8.98.6
]
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca00680
Methane metabolism
dca01100
Metabolic pathways
dca01120
Microbial metabolism in diverse environments
dca01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Desca_0819
Enzymes [BR:
dca01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
Desca_0819
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.3 formate dehydrogenase (coenzyme F420)
Desca_0819
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Gene cluster
GFIT
Motif
Pfam:
Fer4_8
Fer4_17
Fer4_9
FrhB_FdhB_C
Fer4_7
Fer4_10
Fer4_22
Fer4
Fer4_4
Fer4_6
Fer4_16
FrhB_FdhB_N
Fer4_2
Fer4_3
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
AEF93699
UniProt:
F6B9C3
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All DBs
Position
903580..904698
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AA seq
372 aa
AA seq
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MKSYTIKTNGGDIVGAAQGFLKSLLTSGVISAVLVPQEVTAKTNFVPTLVTDPEMLGAAN
PFAPVNGLNAARLVANLSRDLPEKVGVVLRSCEVRALVELVKLKQAELDNLVIIGVDCIG
TFAPKDYAQMVKAGQVDAKSWASQAADGSNPTEESLRRACTVCTYPEPTNTDIVIGWLGM
NGNLLVNAKDDLDLSGVTGLGQGSAPDSRVKVLEKLVNERAQARAAAISEFRKSVDSMDK
LADVLATCIKCQNCRQACPICFCRECVSAGPIFDHNGEKYMQYAKRKGAIELPTDTVLFH
LTRVNHMGLSCVGCGQCENACPMDIPVGLMFQALTLPVQERFEYEPGRDLEEPLPLTTYK
EHEFPELNTGKH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagttatactattaaaacaaacgggggcgacattgttggtgcggcccagggattt
ttaaaatcattattgacttccggggttatcagcgctgtgctggtaccccaggaagtaacg
gcaaaaaccaactttgtccccactttggtaacggatccggaaatgctgggtgccgcaaac
ccctttgcaccggtaaatggtcttaatgcagccagactggtggccaatttatctcgggat
ttaccggaaaaagtaggtgtggtactacgttcctgtgaagtccgcgctttagtggaattg
gttaaattaaaacaagcggaactggataacctggttattattggtgtagactgcattggc
acctttgctcccaaagactatgcccaaatggtcaaagccggccaggtggatgctaaatca
tgggccagccaagcggctgacggcagcaaccccactgaagaaagtttgcgccgggcttgt
acagtttgtacctatcccgaaccaaccaataccgatattgtgattggctggctgggtatg
aacggaaacctgctggttaacgccaaagatgaccttgatttgtccggtgtaaccggatta
gggcaaggcagtgccccggacagccgggttaaggttttagaaaagctagttaacgagaga
gcgcaggctagagctgccgcgatatctgaattcagaaagtctgtggacagtatggataag
ctggctgatgttttggccacttgcattaagtgtcaaaactgtcgccaagcatgccccatt
tgtttctgccgtgaatgcgtttctgccggtcctatttttgaccataacggggaaaaatat
atgcagtatgccaagcggaaaggcgccattgaattacccactgatactgtcttgttccac
ctgaccagggttaaccacatgggcctatcctgcgtaggttgtggccagtgtgaaaatgct
tgtcccatggatattccggttggcttaatgttccaggctttaaccctgccggttcaagaa
cgttttgagtacgaacccggacgcgacctggaggaacctttaccgttaactacctataaa
gaacacgaatttcctgaattaaataccggtaaacactag
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