Desulfotomaculum nigrificans: Desca_0899
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Entry
Desca_0899 CDS
T01498
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dca03400
]
Desca_0899
Enzymes [BR:
dca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desca_0899
DNA repair and recombination proteins [BR:
dca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Desca_0899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AEF93778
UniProt:
F6B9T0
LinkDB
All DBs
Position
999629..1003114
Genome browser
AA seq
1161 aa
AA seq
DB search
MSLRFIIGRAGSGKSHTYLEEIRQELRRSQEGAPIILLVPEQATFQYEYMLAGTPGLKGI
LRAQVLSFRRLAYRVLQEVGGAARTHIGELGKRMVLRRLLEQRKSELKIFHRAAKQPGFA
DSLAGTLAELKLYRVSPADLQRGQAELLKNRQDSALLDKLNDLILLYSDLEEFLAGRFTD
PDDYLNLLAERLHNSPSVKGAEIYIDGFTGFTPQEYGVIEKLLITANRINVALCFDPALA
NGSCSETDVFYPTVETYHHLREMASSLRVAIEPATFLSMPESADRVPPRFAHNPAVAHLE
RNYFQRPGEVCQQADGIKLVACANRRAEVEAAAREIIGLCRDHGLRWRDIVVMLRDLDNY
SHLISTVFQDHGIPVFIDQKRSVLHHPLVDLMRSALEVVIQQWAYDPVFRYLKTDLVPVL
RDDVDKLENYVLAHGIRGSRWTDGRDWTYRKHYTLEQEDRLYQQETGELNAINQVRYQAV
SHLKSFADSVARAQNVRDITTALFELLASLDVPGRLERWAREAEERSRLIEAREHAQLWN
NVLMLLDEIVEALGDEKLTLEEYAQVLEAGLESLRLGIIPPGLDQVVVGTLERSRNPNVK
AALVLGISDGVLPARPGEDGLFSDFERELLKQQGITLAPGARRKLFDEQYLIYVALTRAS
DFLWLSYPQADDEGKALVTSQVIARVKELLPNLREQVIQVEPPDPGREMDFIASRDRSLS
YLAAMLREVKAGRPVDPMWQDVYTWFARQPELRGQCRRVLAGLEHVNQEAPLPSGIGRKL
YGSKLRASVSRLEKFTSCPFAHFLSHGLRLQERDTFKLAAPDLGQFFHAALKLFTHRLQE
QGRDWAALTRTEAVTMAGEIVNELAPRLQNEILLSSARHRYLINKLRRIVERAVLTLTEH
ARRGSFRPVALEIGFGVPGELPPVTFDLAGGGSMELVGRIDRIDAACEGGQQYLNIIDYK
SGETELKLADIYHGLRLQLLTYLDVALRYAHQLVKQPALPAGMLYFTVKDPLVSSSGPLT
MEQAEQNLLKKLKMKGLLLADPLIIGRMDNQIKGYSELLPVGLNKQGEFYANSRVISGEQ
FALLRRYLEAKLKDIGQRMMNGEIAISPYQRGKDKACRFCIFKPVCQFDPLLEDNLFRLL
TDQDDQVIWSLIKEVLGGDKA
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgagccttagatttattatcggtcgcgcaggcagcggcaaaagtcatacctacctggag
gaaatacgtcaggaactgcggcgcagccaggagggggcacccatcattctgctggtgccg
gaacaggcaacttttcagtatgagtatatgttggccggcacccctggacttaaggggata
ctgcgggctcaggtgttaagctttcgccgcctggcctaccgggtactgcaggaggtggga
ggagccgccaggacccatatcggtgaattgggcaaacggatggtactgcggcgcttattg
gagcagcgcaaatcggaattaaagatatttcaccgggccgccaagcagcccggctttgcc
gatagcttggccggcactctggcggaactgaaactttaccgtgtctccccggctgacttg
cagaggggacaggccgaactgttaaaaaaccggcaggacagcgctttgttggataaatta
aatgatttaatcctgctgtacagtgacctggaggagtttttggccggccgttttaccgac
ccggatgactaccttaatttgttggccgagcgtttgcataactccccctcagttaaaggg
gcggaaatatacatagatggttttaccggctttaccccccaggagtacggggtcattgag
aagctgctgatcactgcaaaccggatcaatgtggccctgtgctttgacccggccttggcc
aacggttcctgcagtgaaacagatgtattttatcccaccgttgagacctatcaccaccta
agggaaatggccagttcactacgggtggccatcgagcccgctacctttttaagtatgccg
gaaagtgctgaccgggtaccgccccggttcgcccataaccccgccgtggctcacctggag
cgaaactacttccaacgtcccggcgaggtctgccagcaggcggatggcattaagctggtg
gcttgtgctaaccgccgggccgaggtagaggcagcggcccgggaaatcattggcctgtgc
cgcgaccatggtttgcgctggcgagacatcgtggtgatgctgcgggacttggacaattac
agccatttaatcagcactgtttttcaggatcatggcataccggtattcattgatcagaag
aggagtgtgttgcatcaccctctggtggacctgatgcgtagtgctctggaggtggtcatt
cagcaatgggcctatgatccggtttttcgctatctaaaaaccgacctggtgccggtgctg
cgggatgatgtggacaagttggagaattatgttttagcccacggcatccggggctcccgc
tggactgacggccgggattggacctaccgcaagcactataccctggagcaggaggaccgg
ttataccagcaagaaaccggggaacttaacgccattaatcaggttcgttaccaggcggtg
tcacacctgaaaagctttgccgactcggtggcccgggcccaaaatgtgcgggatattacc
accgccttgtttgaactgctggcctccctggatgtgcccggccggttggaacgctgggcc
agggaagctgaggagcggagccggttaattgaagcccgggaacacgcccagctctggaat
aacgtgcttatgctactggatgaaattgtcgaggccctgggggatgaaaaacttactctg
gaagaatacgcccaggtgctggaggccggcctggaaagcctaaggctgggcattatcccg
ccgggcctggatcaggtggtggtgggtaccctggagcgatcccgcaaccccaatgttaag
gcagctttggtgcttggcattagtgacggtgtactgccggcccggcccggcgaagatggg
ttattctcggattttgaacgggaactattaaagcaacagggaatcaccctggctcccggg
gccaggcggaagctgtttgatgaacagtatttaatctatgtggctttaaccagggccagt
gatttcctgtggctcagttatccccaggccgatgacgagggtaaagccctggtaacctcc
caggttattgcccgggtaaaagaactgctgcccaaccttagggaacaggtaattcaggtg
gaaccaccggacccgggcagggaaatggatttcattgccagccgggatcgcagcctatca
tatttggctgccatgctcagggaagttaaggctggtcgaccggtggatcccatgtggcag
gatgtgtatacctggtttgcccggcagccggagctaagggggcaatgtcggcgggtgctg
gcggggttggagcatgttaatcaggaggcaccgctgcccagtggcatcgggcggaaactt
tacggcagcaaattaagggccagtgtgtcccggttagaaaagttcaccagctgccccttt
gctcattttctatcccatggtctaaggttgcaagagcgggatacctttaaattggccgcc
cctgatttaggacaatttttccatgcggcgcttaaattatttacccatcgcctgcaggag
cagggccgggactgggctgccctaaccagaacggaagctgttaccatggccggggaaatt
gtcaacgaattagccccccggttgcaaaatgaaatcctgcttagctccgcccggcatcgt
tacctgattaataaattaagaaggattgtggaacgggcagtactgactctgaccgagcat
gcccgccggggcagtttccgaccggtggcgctggaaattggctttggtgtacccggtgaa
ctacccccggtgacctttgatttggccggcggtggcagcatggaactggtggggcgcatt
gaccgcatcgatgccgcctgtgaagggggccaacaatacctgaatatcattgactataag
tccggcgagacggaacttaaactggctgacatctatcatggtttgcggctgcaactgctg
acttatcttgatgtagccctgcgttatgcccatcaattggtaaagcagccggctttaccc
gccgggatgttgtactttactgttaaggatccgctggttagcagttctggccccttgact
atggaacaagccgaacagaatctacttaaaaagttaaaaatgaagggtttgctcttggct
gaccccttgatcattggtcggatggataaccaaattaaaggctactcggaactgttgccg
gtggggttaaataagcagggtgagttttatgccaattcccgggtcattagcggagaacag
tttgctcttttacgaaggtacctggaagctaagttaaaggacattgggcaacggatgatg
aacggggagattgccataagtccttaccagcggggtaaagacaaggcctgtcggttctgc
atttttaaaccggtatgccagtttgacccgctgctggaggacaacttgtttagactgctg
acggaccaggatgaccaggttatctggtccttaatcaaggaagtactgggtggtgataaa
gcatga
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