Desulfotomaculum nigrificans: Desca_0984
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Entry
Desca_0984 CDS
T01498
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dca03016
]
Desca_0984
Enzymes [BR:
dca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Desca_0984
Transfer RNA biogenesis [BR:
dca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Desca_0984
Prokaryotic type
Desca_0984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AEF93858
UniProt:
F6B2M9
LinkDB
All DBs
Position
1100299..1101036
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AA seq
245 aa
AA seq
DB search
MRNIKLTIQYDGSRYRGWQRLGDTDVTIQGKIEAVLSRMTGEEIEIFGSGRTDTGVHALA
QVANFKTNSNMSTGEIMDYLYHYLPEDIVVTRVEEVSDRFHARYNVKSKKYLYKIWNHKY
HDPFRRKFVHHVPEPLQIKAMQKAAAFLIGEHDFASFRASKSKKKSSVKTIYAIDIVKKD
PLIKITVHGNGFLHNMVRIIVGTLVEVGLGHMRPEQVKEILSKKDRSAAGPTAPAKGLYL
LEVEY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtgaggaatatcaagctgaccatacaatatgatggttcccggtatagggggtggcagcgg
ctgggggatacggatgtgaccatccagggaaagatcgaagccgtactgtccaggatgacc
ggtgaggaaattgaaatatttggctccggacgcaccgatacgggggtacacgcgctggcc
caggtggccaattttaagactaacagtaacatgtccaccggcgaaattatggactatctg
tatcattacctaccggaagatatcgtggttaccagggtggaggaagtatctgataggttt
cacgcccggtacaatgttaaatctaaaaaatacctatataaaatatggaatcataaatac
catgacccatttcggagaaagtttgtacatcatgtaccggagcctttgcagattaaggcc
atgcaaaaggctgccgcttttctcattggtgaacatgattttgccagtttccgggcgtct
aaatccaagaagaaatccagcgttaagaccatttacgccattgacattgtaaaaaaggat
ccgctgattaaaattacggtgcatggcaacgggtttttacataacatggtgcgcattatt
gtgggcaccctggtggaggtggggctgggccacatgagaccggagcaggtgaaggagatt
ttatctaaaaaagatcgcagcgctgccggccccactgccccggctaagggattatattta
ctggaagtcgaatattag
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