Desulfotomaculum nigrificans: Desca_1031
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Entry
Desca_1031 CDS
T01498
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca00550
Peptidoglycan biosynthesis
dca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Desca_1031
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dca01002
]
Desca_1031
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dca01011
]
Desca_1031
Enzymes [BR:
dca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Desca_1031
Peptidases and inhibitors [BR:
dca01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Desca_1031
Peptidoglycan biosynthesis and degradation proteins [BR:
dca01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Desca_1031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Transpeptidase
Peptidase_S13
Adhesin_P1_C
Motif
Other DBs
NCBI-ProteinID:
AEF93902
UniProt:
F6B2S3
LinkDB
All DBs
Position
1152355..1153542
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AA seq
395 aa
AA seq
DB search
MKTRKYLIIFLCVMLLILGNPIMATGTPTKDGTTSDGQPPKVRASAACLMEVATGRIYFA
KQGDKRREPASLTKIMTAILAIEKGNLKDVVTVGKKAAAVSMGQDIGLSPGDRLYLEDLL
KAALMYSANDSTVAIGEHIAGSHDAFIKMMNDKAKVLGMKDTRYANTNGYHNPNHYTTAI
DLAKLTCYALKNPVFASFVRTREATITWLPKEKTGNPQEVQTETPRQRVIHNTNALLESN
FEGINGVKTGTTPRAGKCLIASATREGRQLVAVVLNSPNRWDDATNLLEYGFREFRPQVL
SEKDEVMGEIPVVEGVEQKVTLVAAKKVEAYVARIDSDKVERKINLAPPPKAPIKQGIKL
GKATFVLHGQEIATVDLVANRNIKRLPWFKRIFKK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactagaaagtacttaatcatttttttatgtgttatgctattaattcttgggaac
ccgataatggccaccggcactccaaccaaggatggtactacctcagatgggcaaccccca
aaggtacgggcctcagccgcctgtttgatggaagtggccaccggccgaatttattttgcc
aagcagggggataaaagaagagagccggcaagtttgaccaaaattatgacggctatttta
gctattgagaagggcaatttaaaagatgtggtgacggtggggaaaaaagcagctgcagtg
tctatggggcaagatattggtctttcacccggtgaccggctttatctggaggatttgctg
aaggccgccttaatgtattcggctaatgattctacggtagccatcggcgaacatatcgcc
ggcagccatgatgcttttattaaaatgatgaatgataaagccaaggtcctggggatgaaa
gatacccggtatgccaataccaacggctaccataatccaaatcactacaccacggccatt
gatttggctaaattaacttgttatgctttaaaaaatccggtatttgccagctttgtaaga
accagagaagccaccatcacctggttgccaaaggaaaaaacaggcaatccccaggaggtg
caaaccgaaactccccgccagcgggtcatccacaataccaatgctttactggaatcaaat
tttgaaggtattaacggggttaaaacagggaccacaccaagggcgggcaaatgtctgatt
gcctccgctaccagggaagggcgccagttggtggcggtggtcttaaacagccccaatcgt
tgggatgatgccacgaatctgttggaatacggatttagggagtttagaccacaggtatta
tcggaaaaggatgaggtaatgggcgaaataccggtggtggaaggtgtagaacaaaaggtc
actttagtggcggcgaaaaaagtagaggcctatgtggcccgcatcgatagcgacaaagta
gaacgaaaaatcaacctggccccgccacctaaagcacccatcaagcaaggcattaaattg
ggtaaagcaacctttgtcttacatggtcaggaaatagctacggtggacctggtggctaac
cggaatattaaacgcttaccatggtttaagcgaatatttaagaaatag
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