Desulfotomaculum nigrificans: Desca_1204
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Entry
Desca_1204 CDS
T01498
Name
(GenBank) Phenylalanyl-tRNA synthetase beta chain
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Desca_1204
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dca01007
]
Desca_1204
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dca03016
]
Desca_1204
Enzymes [BR:
dca01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Desca_1204
Amino acid related enzymes [BR:
dca01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Desca_1204
Transfer RNA biogenesis [BR:
dca03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Desca_1204
Prokaryotic type
Desca_1204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
B3_4
FDX-ACB
B5
tRNA_bind
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AEF94065
UniProt:
F6B410
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All DBs
Position
1319901..1322321
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AA seq
806 aa
AA seq
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MRVSYNWLKEYVDITISPQELADRLTLAGLAVDAVEEVGAEIENVVTGRITKIEKHPNAD
KLVVCTVDVGQPETLQIVTGATNVREGHIIPVALEGAKLAGGLQIKRSKLRGVESQGMLC
SGQELGIEAKLLSPDMAHGILILPEDVPIGQDAKEILGLNDFILDLDLTPNRGDALSMIG
VARDVAAILKQDLKIPEPEFTEGEEKVQDLAQVDIVDQDLCRRYVARVIKGVKVGVSPMW
LQNRLRAAGVRPISNIVDVTNYVMLELGQPLHAFDYDRLKNHHIIVRRAKDNEKIVSLDG
VERTLNPDMLVITDEAGPVGVAGVMGGLDSEVTDQTTSVLLESAYFHPTNIRRTSKALGL
RSESSMRFEKGIDINGCLRAANRAIQLMQQLAGGTVAAGVIDNFPAPITEKTILLRPQRV
NWVLGTDIAREEIIDILCRLQFKVQSQNDDLMVTVPTFRPDISREIDLIEEVARLHGFNQ
IPETLPFGPSTQGHRTPEQQLVWDVREIMTACGFFEVVTYSFVHPRIFDMMNLPPDSRFR
NVVKLQNPLSEEQSVMRTVLVPSLLEVLQRNINRRNKEGAIFEIARVFYPQQGQQLPAEV
PVLAAVAIGQTPKTWNQPARPMDFFFIKGVAEQLLDTLGVAGATFSRHQDPSFHPGRCAQ
IKVNGEVLGVVGELHPNVIENYELPERAVALKIDLQVLAQADRPVKQYQGLPKFPAVERD
LAVLVKQEVSAADMLDVIKKAGGNLLRHVDIFDVYQGTQVPQGFKSVAFSMKFQAPDRTL
TDEEINQKMERITKNLTAQTGAELRK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtttcctataactggctaaaagaatatgtagatataaccatatcaccccaggaa
ctggcggaccggctgaccctggcgggcctggccgtggacgcggtggaagaagtgggggca
gaaattgagaatgtggtcaccgggcgcatcactaaaattgagaagcatcccaacgcggat
aaactggtggtctgcacggtagatgtgggtcaacccgagaccctgcagatcgtcacgggg
gccaccaacgtgcgggagggtcacattatcccggtggcactggaaggagctaaactggcc
gggggcctgcaaattaaacggtctaaactaaggggcgtggaatctcagggtatgctctgc
tccggtcaggaactgggtatagaggccaaactgctctccccggatatggcccacggcatt
ctgatcctgcccgaagacgtgcctattggtcaggatgccaaggaaatattgggacttaac
gattttattttagatttagacctaacacccaaccggggtgatgctttatccatgatcggg
gtggctagggacgtggccgccatcctgaagcaagatttaaaaatccctgagccagagttt
accgagggagaggaaaaggtgcaggacctggcgcaagttgatattgtggaccaggatttg
tgccgccgctatgtggcccgggtgattaaaggggtcaaggtgggagtttcccccatgtgg
ctacaaaaccggcttagagccgccggtgttcggcccatcagtaacattgtagatgtcacc
aactatgtgatgctggagttgggtcagccactgcatgcctttgattatgaccgccttaaa
aaccatcatattattgtgcggcgggccaaggacaacgagaagatcgtttccctggacggt
gtagagcggaccttaaacccggatatgctggtcattaccgatgaggccggcccggtgggg
gtagccggggtaatgggcggtctggacagtgaagtcactgatcagaccaccagtgtgttg
ctggaatcagcgtacttccatcccacaaacatccggcggacttccaaagccctgggcttg
cgttctgaatcctccatgcgctttgaaaagggtatcgatattaacggctgcctgcgggcc
gctaaccgggccatccaactgatgcagcagttggccggtggcacggtggctgccggagtc
attgacaatttcccggcccccatcaccgagaaaactattttgttgcggccccagcgagta
aactgggttttgggtacggatattgccagggaagaaattatagacattctgtgccggttg
cagtttaaggtgcaatcgcagaatgacgacctcatggtcactgtacccaccttccgaccg
gatatctcccgggaaattgacttaattgaggaagtggccaggttacatggctttaaccaa
attcccgagaccctgccctttggtccatccacccagggacatcgtaccccggaacaacag
ctagtttgggacgtcagagaaatcatgactgcctgcggctttttcgaggtggtgacctat
agctttgtgcatccccgtatctttgatatgatgaacctgccgccggacagccggttccgc
aacgtggttaaactgcaaaatccgctcagcgaagagcaatcggtgatgcgtacggtgttg
gtacccagcctgctggaagtgttgcaaagaaacatcaaccgccggaataaagaaggggct
atttttgaaattgcccgggtattctacccgcagcaaggacagcaactgcccgctgaggta
ccggtactggcagcggtggccattggccaaacacccaagacatggaatcaaccggcccgc
ccgatggacttcttctttatcaagggggtagccgagcagctgttggataccctgggagta
gcgggagccactttcagccgccatcaggatcccagcttccaccccggacgctgtgcccaa
atcaaggttaacggggaagtgctgggtgttgttggagaactgcaccccaacgtgatagaa
aactacgaacttcctgagagggccgtggccttaaagatagatttacaggtactggcccag
gccgatcgtccggtgaagcagtaccaaggtttacccaagttcccggcagtggaacgggat
ctggcggtgctggtgaaacaggaagtatcagctgccgatatgctggatgtgattaaaaag
gctggcggtaacctgttacggcatgtggatatctttgatgtttaccagggcacccaggtg
cctcagggctttaagagtgtggctttctccatgaagttccaggctccggaccgcacttta
acagatgaggaaattaaccaaaagatggagcggataactaaaaacctgaccgcccaaaca
ggtgctgagttaaggaaataa
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