Desulfotomaculum nigrificans: Desca_1228
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Entry
Desca_1228 CDS
T01498
Name
(GenBank) Integrase catalytic region
KO
K07482
transposase, IS30 family
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Desca_1228
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GFIT
Motif
Pfam:
HTH_38
rve
HTH_23
Trp_repressor
HTH_50
HTH_28
HTH_36
HTH_29
HTH_11
rve_3
Sigma70_r4_2
HTH_3
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AEF94088
UniProt:
F6B433
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Position
1350638..1351684
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AA seq
348 aa
AA seq
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MAVTFKSTTSVRSFKHLSVFERGQIAALLKEGKSQRYIAKKLGRSPSTISREIKRGTTTQ
RRSDLSTYEKYFPETGQAVYEKNRMNCGAKCKVAQVEGFLKFAENKILRDKWSPDVVVGA
CKKDPNWQNTAIVCTKTLYNYIDQGLLAVRNIDLTLKTRLKPKRKGLRPNKRIMGQSIDC
RPAEVQQRQTFGHWEIDTVIGKRANDSVILTLTERKTRHELLFLLDAKDSQSVNKALLKL
KDYYGERISQVFRTITADNGSEFSELANTLQQWGIKAYFTHPYSSWERGTNERHNGLIRR
FVPKGKAIKDFSAATIYRIQNWLNKLPRKILGYKTPEECFCEELSKIA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggctgttacatttaagtctaccacatctgtacgttcttttaaacacctaagtgtcttt
gaaagaggacaaatagctgcgctgttaaaagagggtaagagccaacgttacatagctaaa
aaattaggccgctcaccaagcacaattagccgggagattaaaagaggaactacaacccaa
aggcgctctgacttgtcaacttatgaaaaatattttccggaaaccgggcaggcggtttac
gaaaaaaatcgtatgaactgtggggcaaagtgcaaggtggcccaggttgaaggttttcta
aaatttgcagaaaacaagatactacgtgataaatggtccccggatgtagttgtcggtgca
tgcaaaaaagatcccaattggcaaaatactgcaattgtttgcacgaaaaccttatataac
tacatcgatcaagggttactggctgttcgtaatatcgatttaaccctcaaaacgagatta
aagccaaagaggaagggattacgtccaaacaaacgaataatgggacaaagtatcgactgt
cgaccggcagaagtgcaacaacgccagacttttgggcattgggaaattgatacggtaata
ggtaaaagagcaaatgattcagtcattctaaccctaactgaacgaaaaaccagacatgaa
ctacttttccttttagatgctaaggatagccaatctgttaataaagccctcttaaaactt
aaagattattacggagaacgaatttcacaagtatttcggacaattaccgctgataatggt
tcagagttcagcgaattggcaaatacgttacaacaatggggtattaaagcatacttcact
catccctattcttcttgggaacgtggaactaatgaacgccataatgggttaatacgccgg
tttgttcctaaagggaaagccattaaggatttttcagcggccacgatttaccgcatacaa
aattggctaaataagcttccacgtaaaatattaggatataagacgcctgaagaatgtttt
tgcgaagagctgtccaaaatagcttaa
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