Desulfotomaculum nigrificans: Desca_1252
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Entry
Desca_1252 CDS
T01498
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dca03009
]
Desca_1252
Enzymes [BR:
dca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Desca_1252
Ribosome biogenesis [BR:
dca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Desca_1252
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
HrpE
Motif
Other DBs
NCBI-ProteinID:
AEF94112
UniProt:
F6B457
LinkDB
All DBs
Position
1375344..1376267
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AA seq
307 aa
AA seq
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MDSYLFEVDQENAKSRLDVFLSGQCHDLSRSYIQRLIEEGQVTVNDLPTKANYKLRVGDR
VAVEVPPAEELQVVPEPIPLDIYYEDNDVIVVNKPRGMVVHPAEGNTSGTLVNALLYHCR
DLSGINGVLRPGIVHRLDKDTSGLIMVAKNDLAHNSLAQQLKDRTVTRRYRALVHNNIRE
EVGTVNAPIGRDPRDRQRMAVVERNSKPAVTHYRVLERFGQYTLVECRLETGRTHQIRVH
MAYIGHPVVGDPKYGPTKPHFDLDGQLLHAGVLGFKHPTTGQYLEFTAPLPDIFEQVLHK
LKSSGVS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggactcatatttatttgaagttgatcaagagaatgccaaaagcaggctagatgtcttt
ctttccggccagtgccacgatttaagccgttcttatatccagcggttaattgaagaggga
caggttacagtaaacgatctgccaacaaaagccaactacaagctgcgggtgggggaccgg
gtagccgtggaggttcctcctgccgaggaactacaggtggtaccggaacctattcccctg
gatatttattatgaagataatgatgttattgtggttaataaacctcggggaatggtggtg
catcccgccgaggggaatacttcaggcacactggtaaatgccctgctgtaccattgccgt
gatttgtcaggtattaacggggtgttacgccccggcattgtccatcgattagacaaggat
acatcaggactaatcatggtggccaaaaatgacctggcccataattccttggcccaacaa
ttaaaggaccggactgttaccagaaggtaccgggctttagtacataacaatattagggaa
gaagtaggcaccgttaacgcacccattggtcgggaccctagagacaggcaaaggatggcc
gtggttgaacgaaattccaagccggcggttacccattaccgggtactggaacggtttggt
caatacaccctggtggaatgccggttagaaaccggacggacccaccaaatcagagtgcat
atggcctatatcggccacccggtggtgggggaccctaagtatgggccgaccaagccccat
tttgacctggacggccaacttctacacgccggggtgcttggctttaagcatcccaccacc
ggtcagtacttggagtttacagccccgttgcctgatatttttgagcaagttttacataag
cttaagtcgtctggcgtttcctag
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