Desulfotomaculum nigrificans: Desca_1283
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Entry
Desca_1283 CDS
T01498
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Desca_1283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dca03400
]
Desca_1283
Enzymes [BR:
dca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desca_1283
DNA repair and recombination proteins [BR:
dca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Desca_1283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Cas3-like_C_2
AAA_16
DUF7129
nSTAND_NTPase5
PIF1
AAA_19
AAA_30
Zn_ribbon_6
Zeta_toxin
ADDB_N
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
AEF94142
UniProt:
F6B4N0
LinkDB
All DBs
Position
1408525..1410729
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AA seq
734 aa
AA seq
DB search
MQYVEVAVSVPVGLNQTFHYRVPANLSGQVSRFSRVEVPFAGRLVQGFVLGFSDPPNLKM
IKDVKRVVEKQAYLNEELFQLAQWMVQRYLCSIGDALQTIAGSPAGAARVKERVIVAIDG
IDGDDKLTGLVRAPKQRRALEVALASPGLKKSELAELAEVSTPVIDALLAKGLLQEVESY
KKIMPDPPPRQESLQLTPEQLTVVNQLVNAINSPKPSAWLLHGVTGSGKTEVYLRAIEHT
LNLGRQAIVLVPEISLTPQMVERFRSRFGDAVALLHSALSNGEKYAEKDRIRTGQAMVVL
GARSAIFAPTPKLGLIIIDEEHESSYKQDESPKYHAREVALQRAALNQGVVLLGSATPAI
ESYCRARPGGPYGLLTMTQRIDQRPLPRVQIVDMRQELAGGNTGIFSLALQRALAQRLAR
QEKSILFLNRRGFASIVVCRQCGQVMKCPHCDISLTLHHDGILRCHYCGHRTANPRVCPS
CGGKAIRSFGVGTQRVEEEVRRLFPDCQVLRMDADTTSRKGSHQKLLDEFSRGGGQILIG
TQMIAKGLDIPQVTLVGVISADVTLHMPDFRSAERTFQLLTQVAGRAGRGEKSGEVIIQT
YDPEHFSILTARNHDFLSFYHKEMTHRKALKYPPFSHLIKILFSGLNEADVIAAAEWWQD
KLTAIKHECGGQEIEILGPAPAGIPKIKDRWRWQLVIKGPDSREIRNVARIALAQAGIRF
KQVAVSIDVDPVSL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatgtggaagtggctgtatcggtaccggttggtctaaaccaaacctttcactat
cgggtacctgccaaccttagtgggcaagtaagcaggttcagccgggttgaggtacccttt
gccggcagattggtgcaggggtttgtgttgggatttagtgatccacctaatttaaaaatg
atcaaagatgtaaaaagagtggtggaaaagcaagcctacttaaacgaagagctgtttcaa
ttggctcaatggatggtgcagcgctatttgtgcagtattggcgatgccctgcaaactatt
gctgggtcaccggccggggcagccagagtcaaagaaagggtaattgtggccatagatggg
atagatggggatgataaacttacgggactggttagagctcccaagcaaaggcgggcattg
gaggtggctctggcgagtcccggactcaagaagtcggagttagctgaattagcggaggta
tctacaccggttattgacgcgttgttagctaaagggttgttgcaagaagtggagagttat
aaaaaaataatgccggacccaccaccccggcaggaaagtctgcaactgaccccggaacaa
cttacggttgttaatcaactggttaacgccattaactccccaaagccttcagcctggtta
ttgcacggtgttaccggtagtggtaagaccgaggtttacttaagggctattgaacatacc
ctaaatttaggccgtcaggccattgtgctggtgccggaaatttccttaaccccgcaaatg
gtggaaagattcaggtctcgtttcggtgacgcggtggccttgctacatagtgctttatcc
aatggggaaaaatatgccgaaaaagatcgcataagaaccggccaagctatggtggtttta
ggcgcccgttcagctatttttgccccaacgcccaaattagggttgattattattgatgaa
gaacatgaatcttcctataaacaggatgaaagccccaagtatcatgcccgtgaggtggcc
ctgcaaagggcggccttaaaccaaggtgtggtgctgctgggcagtgccacaccggctatt
gaaagttattgccgagccagacccggaggcccttatgggcttttgactatgacccaaaga
atagaccaacggccattaccacgggtacaaattgttgacatgcgtcaggaactggccgga
ggaaataccggtatttttagtttggctttacaaagggccctggcccagagattagcacgt
caggagaaaagtattctcttccttaaccggcgaggttttgccagtattgtagtgtgtcgg
caatgcgggcaagtaatgaaatgtccccattgtgatatttccttaaccttacaccatgat
ggtattttacgatgccattactgtggtcaccgaaccgccaacccacgggtttgtccatcc
tgtggcggcaaagctatccgcagttttggggtggggacccagcgggtggaagaggaagta
cgccgtctcttcccagactgtcaggttttgcgtatggatgctgataccacctcccgcaaa
ggttcccaccagaagttgctggatgagtttagccgggggggcggacagatactgattggt
acccagatgattgctaaagggttagacattccccaggtaaccctggtgggggttattagc
gccgatgttaccctgcatatgccggactttagatctgcagaaaggacctttcaattgttg
acccaggtggccggtagagccggccgcggggaaaaatcgggagaagtaattatccaaacc
tatgaccccgaacattttagtattttaacggccaggaaccacgattttttaagcttttat
cataaagagatgactcaccggaaagccttaaagtacccaccctttagccacttaataaaa
attttgttcagcggcttaaatgaggcagacgttattgccgccgccgagtggtggcaagat
aagttaaccgccatcaagcatgagtgtggtgggcaagaaatagagatattaggccccgct
cccgccggtatacccaaaatcaaagatcgctggcgttggcaattagtaataaagggcccg
gacagccgggaaataagaaatgtggccagaatcgcattggcacaagcaggtatcagattt
aaacaagtggccgtaagcatagatgtagaccctgtaagtttatag
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