Desulfotomaculum nigrificans: Desca_1413
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Entry
Desca_1413 CDS
T01498
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Desca_1413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dca03400
]
Desca_1413
DNA repair and recombination proteins [BR:
dca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Desca_1413
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
AEF94269
UniProt:
F6B5E8
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Position
complement(1539263..1541884)
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AA seq
873 aa
AA seq
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MALTPMMRQYLEIKEQYPDAILFFRLGDFYEMFFEDAKLASRELEITLTGRDAGEPERVP
MCGVPFHAADNYIAKLIDKGYKIAICEQVEDPKSAKGLVKREVIRVITPGTVIDGNMLSD
KDNNYLVAVCRIGQSYGLAVSDLSTGLFQVTQMTGQWALNQLLDELIRLAPREVVLPHSL
WQDEGVKKSFQELEGTTITSLADQIFTQEQAQQALTEHFGQAKTTALDCWQSPAVCGAAG
GLLHYLLETQKRKLQHITEITSYFTQSYMILDGIARRNLEICKSLRDGGKKGSLLSVLDL
TRSAMGGRMLKAWLEQPLIDIKAINERLDAVQELVDSVLLRDELATALKNVYDMERLTAR
AAYGSANARDMLALLASLQMLPPLRQALTNCQSKLLKRIYDQFDTLEDLKGLLESSIAED
APITLRDGGLIKAGYSQEVDQLRAVARDGKSWLAGLESREKEKTGIKSLKVGFNKVFGYY
LEVTKANLNLVPEYYQRRQTLANAERFITPELKEYESMILGAEDRLVELEYNLFVDVRNQ
VAAEVSRIQHTALLVAQVDVLVALAEVAARQGYVRPEVNNSGVIEITEGRHPVVEINLGP
GCFVPNDTYIDTDRHRLALITGPNMGGKSTYQRQVALIVLMAQVGSFVPASKASIGIVDR
IFARVGASDDLTSGQSTFMVEMLETKQIMDHATSQSLVIIDELGRGTSNLEGMAIAQAVI
EFLHDVVGCRTLFSTHYHELAELEGRLAGLKNYATAVKEQGDEVTFLRKVIRDQASKSYG
IHCARLAGLPGQIIQRANQLVQQLEFNQRAAQEVVAGKTQVAASVEQLALFPEKNEEHDE
FKKEIVALDIANMTPLESLNYLYQLQRRLQGKK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
gtggctttaaccccgatgatgcgtcagtacttagaaatcaaagagcaataccctgatgcc
attttgttttttcggttaggggatttttatgaaatgtttttcgaggatgctaaactggca
tcccgggaattagagataactcttactggtcgggatgccggtgagcctgagcgggttccc
atgtgtggtgtcccttttcatgccgctgataattatattgccaaactaatagataaagga
tataaaattgccatctgtgaacaggtggaggatcctaagtcggccaaaggcctggttaaa
cgggaagtaattcgggtgattacccctggcactgtgattgatgggaacatgctgagtgac
aaagataataattatttggtagcagtttgccggataggccagagttacggcttggcagta
tcagatttatcaaccggattgtttcaagtaacccagatgacaggccagtgggccctgaat
caattattggacgaattaatcaggttagctcccagggaagtggtgctaccgcatagcctg
tggcaggatgaaggggtgaaaaaatctttccaagagctagaagggactaccattaccagt
ttagctgatcagatctttacccaggaacaggcccagcaggccctaacggaacattttggc
caggctaaaacaactgccctggactgctggcaaagcccagcggtttgcggtgccgccggc
ggactcttacactatttactggagacgcaaaaacgtaaacttcagcacatcacggaaatc
acttcttatttcacccaatcttacatgattttagatggtatcgccaggcgtaatctggaa
atatgcaagtcactccgggatggcgggaaaaagggtagcttactatcagttctggattta
accaggtcagccatggggggtagaatgttaaaagcctggttggaacaacccctaattgat
ataaaggccattaatgaacggttggacgccgtacaggaactggttgactctgtgttactg
agggacgagttagctacagctttaaaaaacgtctatgatatggagcggttgaccgcccgg
gccgcttacggcagtgccaatgcccgggatatgttagccttgctggcctctttgcaaatg
ctgccccccctgcggcaggccttaaccaactgtcagagtaagctgttaaaaaggatatat
gaccaatttgatactttggaggatctcaaaggcctgttagaatcatccattgctgaggat
gccccgataacccttagggacggagggttaattaaagcgggctacagtcaggaagttgac
cagttaagggcggtggccagggatggcaagtcctggctggccggtctagaaagccgggaa
aaggaaaagaccggtattaaatctctgaaagtaggatttaacaaagtctttggttattat
ctggaagtaaccaaggccaatttaaatctggtgccggagtattaccagcggcgccaaaca
ctggccaatgccgagcggtttatcacccctgaacttaaagaatatgaaagcatgatttta
ggggccgaggaccggttggtagaattggaatataacctgtttgttgatgtacgcaaccag
gtggcagcggaagtgtcccggattcaacatacagccttactggtggcccaggtagatgta
ttggtagccctagcggaagtagctgcccgccagggatatgtacgccccgaagtaaacaat
agcggtgtgattgaaataaccgaaggccgccacccggtggtggaaattaacctggggcct
ggttgttttgtaccaaacgatacctatatagataccgaccggcacagattggccctcatc
accggtcccaatatgggtggtaagagtacctatcaacgtcaggtggccctaattgtatta
atggcccaggtgggtagttttgtacccgccagcaaagccagtattggcattgtggaccgg
atatttgcccgggttggtgcttccgatgatcttacctcaggccaaagtacattcatggta
gagatgttggaaactaaacaaattatggatcatgctacgtcccaaagtttagtcattatt
gatgagctgggccggggaacttccaacttggagggtatggccattgcccaagcggttatc
gagtttttgcatgatgtggtaggatgccgcaccctgttttccactcactatcatgaattg
gccgagctagaaggccggttggccgggttaaaaaattacgccacagctgtcaaggagcag
ggggatgaagtcacctttttgcgtaaagtgattcgggatcaggccagtaaaagttatggc
atccattgtgctcggttggccggactccccgggcagataatccagcgggccaaccagttg
gtgcaacaactggagtttaaccagcgggctgcccaggaggtggttgccggtaaaacccaa
gtggcggcctcagtcgaacagttggccttgttcccggaaaaaaatgaagaacatgatgaa
tttaagaaagaaattgtggccctggatattgccaacatgactcccttagaaagtctaaat
tatttgtaccaactgcaacgcaggctacagggtaagaagtaa
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