Desulfotomaculum nigrificans: Desca_1467
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Entry
Desca_1467 CDS
T01498
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dca03016
]
Desca_1467
Enzymes [BR:
dca01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
Desca_1467
Transfer RNA biogenesis [BR:
dca03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Desca_1467
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_22
AAA_18
AAA_16
AAA_33
AAA_24
SRP54
AAA_28
RsgA_GTPase
nSTAND3
TniB
TsaE
AAA_14
AAA
NB-ARC
ORC-CDC6-like
Viral_helicase1
ABC_tran
NACHT
CoaE
AAA_25
Arf
Motif
Other DBs
NCBI-ProteinID:
AEF94322
UniProt:
F6B603
LinkDB
All DBs
Position
complement(1591556..1592683)
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AA seq
375 aa
AA seq
DB search
MVKDISISEALKIPNACFVDIRSEKEFAEGAIPGAINIPLFNNEERAQVGTTYKQIGIDE
AKILGLQIAGPKFPGLFNQLSALSKEKPVVLYCWRGGMRSKYTAAVLSSLGVNLYRIKGG
YKEYRRYVHNYLDRQIIPHKSIVLHGLTGVGKTTILKKLAVQGYPVLDLEGLARHRGSAF
GKIGLPPSPSQKDFEAAIVQILTSAAPQGMIIVECESRRVGKLIVPPAVFNSMTEGYRVL
LYASVEQRVQRIINEYTNGPNNNVEELQKCTTMLTKSLGKRVVEELNAKLSQRNFTEVFT
YLLTRYYDPLYKYPDKPSDDYDLSVDCSNLDLATSKIARWVESLPEYGVPVENGGENYAD
RGNTEESEDGEGLFS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagatatatctatttccgaggcattaaaaatccccaatgcttgttttgttgat
attcgttcagagaaagaatttgctgagggggcaattcctggggcaattaatataccgtta
tttaacaatgaagaacgggcccaggttggtacaacttataaacagatagggatcgatgag
gctaagatattaggcttgcaaattgccggtcctaaatttccggggctgtttaatcaatta
agtgccttgtccaaagaaaaaccagtggttttatactgctggcggggcggcatgcgaagt
aaatacactgcggcggtgctgagttccctgggggttaatctttatcgaataaaaggtggt
tataaggaatatcgccgttatgtacataattatttggacaggcagattattccccataaa
agtattgtattgcacggattgactggagttggcaagaccaccatcttgaaaaaactggcg
gttcaaggctacccagtactggatttggaaggattagcccgtcaccgggggtctgctttc
ggcaagattggtttgcccccttcaccttcccaaaaggattttgaggctgccattgtgcaa
atcctaaccagtgccgcgcctcaaggaatgattattgttgagtgtgaaagtcgtcgggtg
ggtaagctaattgtaccaccggctgtatttaactcaatgactgaagggtaccgggtattg
ctttatgcttcagtggaacaacgggtacagcgaattattaatgagtatactaatggtccc
aataacaatgttgaggaactacagaaatgcactactatgttgactaagtccctgggtaag
cgggtagtggaagagcttaacgctaaattaagccagagaaatttcactgaggtatttact
tatttactcacccgttattatgatcctttgtataagtaccctgataaacccagtgacgat
tatgatttatctgttgattgtagcaatttagacctagccacctcaaaaatagcaagatgg
gttgaatccctaccggagtacggtgtaccagtggaaaacggaggtgaaaactatgcagat
aggggaaacactgaggaaagcgaggacggagaagggctattctcttga
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