Desulfotomaculum nigrificans: Desca_1490
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Entry
Desca_1490 CDS
T01498
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dca03016
]
Desca_1490
Enzymes [BR:
dca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Desca_1490
Transfer RNA biogenesis [BR:
dca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Desca_1490
Prokaryotic type
Desca_1490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
AEF94345
UniProt:
F6B626
LinkDB
All DBs
Position
complement(1613322..1614254)
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AA seq
310 aa
AA seq
DB search
MDGIINVLKPPGMTSHDVVYFVRKITGAKKCGHTGTLDPGATGVLPVCLGKATRLARFVT
EGNKSYRAEMTLGVSTTTQDAFGDIVELKDAFQIYPEQIDNLLPSFIGDIKQTPPMASAI
KINGQRLYDLARQGQSIDVPTRIVTIFDLRVVQSNNWGTAHPRILFDVTCSKGTYVRTLC
ADIGRALGCGAYMSFLLRTRVAGFSIDHAYTLEDLTDLAGAGQISLAVVPMVQAVNHLPL
VEINPTAQRAVCSGATLYPAGVKRISGPIKEDAMVRVQSGQNLLGIYRAVQDMDTGTKRI
IFKPEVVLGE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
ttggacggcattattaatgtcttaaaaccccccggtatgacctctcacgatgtggtttat
tttgtacgtaaaattactggcgcgaaaaaatgtggtcacacaggaacccttgacccaggt
gccaccggtgtgctgcctgtttgcctgggtaaggccaccaggctggccaggtttgtcact
gagggcaataaaagttaccgggcagagatgactttaggtgtatccaccaccacccaggat
gcctttggtgacattgtggaactgaaggacgcattccaaatttatcctgaacaaattgat
aatttgttaccttcctttattggtgatattaaacaaacgccacccatggcatcagctata
aaaattaatggtcaaagattatatgatttggcccgtcaaggacaaagtattgatgtaccc
accaggatagtaacaatttttgatctgcgggtagttcaaagcaataactgggggactgct
catcctcgtattttatttgatgtgacatgctcaaaagggacatatgtgcgtaccctatgc
gcagatattggccgggcgttagggtgtggcgcctatatgtcctttttgctgcgcaccaga
gtggcgggattttctattgaccatgcttatactctggaggacctgacagacctggccggt
gccgggcaaatctccttggccgtggtaccaatggtgcaggctgttaaccatttgcctctg
gtggagatcaatcctacagcccagagggctgtttgttccggcgcaacgctttatccagca
ggggtaaaaaggattagcggtcccattaaagaggatgccatggtgcgggttcagtccggt
caaaacctgttggggatttaccgggcggtacaggatatggacacagggactaagcggatc
atttttaaaccagaagtagttttaggtgagtaa
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