Desulfotomaculum nigrificans: Desca_1542
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Entry
Desca_1542 CDS
T01498
Name
(GenBank) Radical SAM domain protein
KO
K22226
Fe-coproporphyrin III synthase
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca00860
Porphyrin metabolism
dca01100
Metabolic pathways
dca01110
Biosynthesis of secondary metabolites
dca01240
Biosynthesis of cofactors
Module
dca_M00847
Heme biosynthesis, archaea, siroheme => heme
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Desca_1542
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Motif
Pfam:
Radical_SAM
Fer4_12
SPASM
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
AEF94397
UniProt:
F6B6M3
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All DBs
Position
complement(1670749..1671918)
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AA seq
389 aa
AA seq
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MISISKLLGGSENFGDSLRYASGARGQVHGTVSGHGPVVVWNSTRTCNLKCRHCYSESDS
KKYNELSTEEAKRFIDDLAEFKVPVLLFSGGEPLVRPDFFELVAYAGEKGIRTTISTNGT
LITPQVAWRLKDLGVGYVGISLDGIGKINDEFRGREGAYEAALAGIRNCLAVGQRVGLRF
TINRHNYKEINNIFDLIERENIPRVCFYHLVYSGRGSEMVKEDISHAESRAVLDLIMERT
QDFIRRGLDKEILTVDNHADAIYLYLKLHRENPERARQVWELLSHNGGNRTGIAIGEVDW
EGNVHADQFTRNHRFGNVRERKFGEIWTDLSHPILAGLKNRKPLLKGRCAKCQWLDLCNG
NFRARAEAVYGDFWAEDPACYLTDEEIGL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgattagtataagtaagttgttaggtggtagtgaaaattttggtgattccctccgttat
gccagtggtgccagaggacaggtccatggtacggtaagtgggcatggcccggtggtggtc
tggaattccacccgcacctgcaatttgaaatgccggcactgctactcagagtccgacagc
aagaaatataatgagctaagcacagaggaagctaaaaggtttattgatgatttagccgag
tttaaggtaccggtgttattgttctccggtggggaacccttagtgcggccggatttcttt
gaattggtggcttatgccggggaaaaaggaatcagaaccaccatttccaccaatggcacg
ctgataaccccgcaggtagcctggcggctgaaggacctgggtgtagggtatgtgggcatc
agcctggatggtatcggtaaaattaatgatgaatttcgtggccgggaaggggcctatgag
gcagccctggccggtatccgcaactgtttggcggtgggccagcgggtcggactgcgcttt
accataaaccgtcataattataaggaaataaacaatatttttgacctgattgaaagggag
aacatcccccgggtatgcttctaccatctggtatattccggcaggggcagtgagatggtg
aaggaagatatttcccacgctgaatcccgggcagtattggatttaattatggagcgaacc
caagactttatcagacggggtttagataaagagatattaacggtggacaaccacgctgac
gctatttatctatatttaaaactgcaccgggaaaacccggaacgggcccggcaggtgtgg
gaattgttatcccataacggtggtaaccgtaccggtattgccattggtgaggtggattgg
gaaggcaatgtacacgccgatcagtttactcgcaaccaccgctttggcaatgtgcgggag
cgcaagtttggagagatttggaccgaccttagtcaccccattctggcgggattaaagaac
cgtaagccattacttaaaggacgttgtgccaagtgccagtggttagatctctgcaacggc
aacttccgggcccgggccgaggcagtatatggagacttctgggccgaagacccggcttgt
tatttaacagatgaagagattggcttataa
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