Desulfotomaculum nigrificans: Desca_1860
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Entry
Desca_1860 CDS
T01498
Name
(GenBank) regulatory protein DeoR
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dca03000
]
Desca_1860
Transcription factors [BR:
dca03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Desca_1860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_11
CBS
HTH_DeoR
HTH_24
HTH_Mga
GntR
MarR
HTH_20
Rrf2
HTH_PafC
HrcA_DNA-bdg
TFIIE_alpha
HTH_5
HTH_AsnC-type
HTH_Crp_2
CggR_N
PH0730-like_N
Sigma70_r4
HTH_IclR
HTH_7
Put_DNA-bind_N
DprA_WH
DUF977
Motif
Other DBs
NCBI-ProteinID:
AEF94704
UniProt:
F6B8E0
LinkDB
All DBs
Position
complement(1976005..1976640)
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AA seq
211 aa
AA seq
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MELSKRQEAILEIVKKNGPITGEQIAEQLNLTRATLRPDLSILTMAGLLEARPRVGYFYS
GKTADRVLADKITRIKVGDVKSVPIVVPEQCTVYDAVVTMFIEDVGTLYVVREGGLLEGV
VSRKDLLKSTLGGQDIHKLPVGVIMTRMPNVHTTDVNDSVWLAAHKLLTHEVDSLPVVKT
VPGTKEKQYEVVGRFSKTNVTRLFVELGEGS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggaactttccaaaaggcaggaggccattttagagattgttaaaaaaaatggtcccatc
accggtgagcaaatcgcagagcagctcaacctaaccagggcgaccctgcggccggactta
tctattctgaccatggcaggtctgctggaggcgcgaccgagggtaggttatttttatagc
ggcaagactgctgaccgagttttagcagataagatcacccggattaaggtgggcgatgtt
aagtctgtacccattgtggtgcccgaacagtgtaccgtatatgatgcagtggtaaccatg
tttattgaagatgtaggcaccctatacgtggttcgggaaggcggtctgctggagggagtt
gtctcccgcaaggacctgctgaagtccaccctgggtggccaggacattcacaaacttcct
gtgggtgtcattatgacccgcatgcccaacgtacacacaaccgatgtgaatgactcagtg
tggttggcggcccacaagctactaacccacgaagtggattcgctgccggtggttaaaact
gtgcctggtactaaggaaaaacagtatgaggttgtggggagattttccaagaccaacgta
acccggctcttcgtagaactgggtgaagggtcctga
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