Desulfotomaculum nigrificans: Desca_2041
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Entry
Desca_2041 CDS
T01498
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca00300
Lysine biosynthesis
dca00470
D-Amino acid metabolism
dca01100
Metabolic pathways
dca01110
Biosynthesis of secondary metabolites
dca01120
Microbial metabolism in diverse environments
dca01230
Biosynthesis of amino acids
Module
dca_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Desca_2041
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Desca_2041
Enzymes [BR:
dca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Desca_2041
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AEF94880
UniProt:
F6B9I4
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All DBs
Position
complement(2163720..2165060)
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AA seq
446 aa
AA seq
DB search
MRLLGTMKVNHKGHLEIGGCDTVELAQRFGTPLYVIDEALFRQNCRDYYRAFTEEYGAEV
IYASKTLTNLAVCTIVEQEGLGLDVVSGGELYTAAMARFPMHRVYFHGNNKSPEELRQAL
EYKVGRIVVDNLYELELLNQIAGELATRAKIIIRLSPGVEAHTHEYIKTGQIDSKFGLAI
ENGMAMAAVKRCLELNNVELKGFHCHIGSQIFELQSYAHAAEVMMDFVQDVYLATGYLTE
ELDLGGGLGIYYCQGDEPRPVKEYADIMMGALKARAARYNLPLPKIIVEPGRSISGPAGT
TLYTVGAIKDIPGIRKYVSVDGGMGDNPRPALYQAKYEACAANRMTEANAEKVSIAGKCC
ESGDMLIWDIELPALQAGDILAVASTGAYNYSMSMNYNRLPRPAMVLVGGGKADLIVRRE
DYADLIRNDVIPERLRSSVVKLASSR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagactattagggaccatgaaagttaatcataaaggacatttggagatcggtggctgt
gacaccgttgaattggcccaaaggtttggcaccccgttatacgttattgatgaagccctg
ttcaggcaaaactgccgtgattactaccgggcctttaccgaagaatacggtgcggaagta
atttatgccagtaaaaccctgaccaatttagccgtctgcaccattgtcgagcaagaggga
ttgggtttagatgttgtttccggtggtgaactatacaccgcagccatggctcgcttcccc
atgcatagagtatacttccacggcaacaacaaatctccggaggagctcaggcaggctctg
gaatataaagttggccgcattgtagtagataacttgtacgaactggaactgcttaatcaa
attgccggcgaattggcgaccagggctaagatcatcatccggctgagtcccggtgtggaa
gcacacacccatgaatatattaaaaccggccaaattgattccaaatttggtttagccata
gaaaacgggatggccatggcggctgtgaagcgttgcctggagttaaacaatgtggaacta
aagggcttccactgccatattggttcgcaaatctttgagctgcagtcctatgcccatgcc
gccgaggtaatgatggactttgtccaggatgtttacctggccacgggatatttaaccgag
gaattggatttgggtggcggcctggggatttactactgccagggtgatgaacccagaccg
gtgaaagaatacgctgatattatgatgggagcattaaaggccagagccgcccggtacaat
ttacccttaccaaagattatagtagaaccgggccggtccatctccgggcccgccggcacc
accctgtataccgtgggggctatcaaggatattcccggcatcagaaaatacgtctcggtg
gacggaggcatgggtgataacccccggccagccctttaccaagctaaatatgaagcctgt
gcggccaatcgcatgacggaagcaaatgcggaaaaggtttctattgccggtaaatgctgc
gagtccggtgatatgctgatttgggacattgaactgccggctttacaagccggtgacata
ctggcggtggccagcaccggtgcctataactattccatgtccatgaattacaaccgcctg
ccccgaccggccatggtgctggtgggtggcggtaaggctgacttaattgtccggcgggag
gactatgccgacttaatccgtaatgatgtgatacccgagcgccttcgttcctctgtggtt
aaactggcgtcctctcggtag
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